RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 ETFAP13804 333 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 UQCRBP14927 111 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 HOXB9P17482 250 aaPredicted RBP13.3□□□□□ -0.28
LIMS1-206ENST00000414829 HK1P19367 917 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 ACVR2AP27037 513 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 P2RX1P51575 399 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 MVDP53602 400 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 CASP9P55211 416 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 BCL2A1Q16548 175 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 GTDC1Q4AE62 458 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 LIN52Q52LA3 116 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 PAGE3Q5JUK9 113 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 WIPI1Q5MNZ9 446 aaPredicted RBP13.3□□□□□ -0.28
LIMS1-206ENST00000414829 COX20Q5RI15 118 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 PDZK1Q5T2W1 519 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 GCNT6Q5T4J0 391 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 VASNQ6EMK4 673 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 TYW3Q6IPR3 259 aaKnown RBP13.3□□□□□ -0.28
LIMS1-206ENST00000414829 APOOLQ6UXV4 268 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 FRRS1Q6ZNA5 592 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 FGD2Q7Z6J4 655 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 YRDCQ86U90 279 aaKnown RBP13.3□□□□□ -0.28
LIMS1-206ENST00000414829 FJX1Q86VR8 437 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 DOLPP1Q86YN1 238 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 SLC30A8Q8IWU4 369 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 TMCO5AQ8N6Q1 288 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 GATSQ8NAP1 163 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 AURKBQ96GD4 344 aaPredicted RBP13.3□□□□□ -0.28
LIMS1-206ENST00000414829 ELAC2Q9BQ52 826 aaKnown RBP13.3□□□□□ -0.28
LIMS1-206ENST00000414829 PRDM14Q9GZV8 571 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.3□□□□□ -0.28
LIMS1-206ENST00000414829 SLC6A13Q9NSD5 602 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 FBXO34Q9NWN3 711 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 MED11Q9P086 117 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 SPRR3Q9UBC9 169 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 MKLN1Q9UL63 735 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 MEMO1Q9Y316 297 aa13.3□□□□□ -0.28
LIMS1-206ENST00000414829 MYO18BQ8IUG5 2567 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 TRBV5-3A0A0A0MS03 114 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 A0A0G2JPF8 293 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 AGAP5A6NIR3 686 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 HNRNPCL2B2RXH8 293 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 HNRNPCL3B7ZW38 293 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 ADAM10O14672 748 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 HNRNPCL1O60812 293 aaKnown RBP13.29□□□□□ -0.28
LIMS1-206ENST00000414829 UGT2B17O75795 530 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 NUDT14O95848 222 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 BCHEP06276 602 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 DBIP07108 87 aaKnown RBP13.29□□□□□ -0.28
LIMS1-206ENST00000414829 HNRNPCL4P0DMR1 293 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 AGAP20933 346 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 DRD4P21917 467 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 ME2P23368 584 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 ELK4P28324 431 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 SLC6A8P48029 635 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 SEC24CP53992 1094 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 EEFSECP57772 596 aaKnown RBP13.29□□□□□ -0.28
LIMS1-206ENST00000414829 CRYZQ08257 329 aaKnown RBP13.29□□□□□ -0.28
LIMS1-206ENST00000414829 FUT5Q11128 374 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 CBFBQ13951 182 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 LARS2Q15031 903 aaKnown RBP13.29□□□□□ -0.28
LIMS1-206ENST00000414829 CD226Q15762 336 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 GXYLT1Q4G148 440 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 EIPR1Q53HC9 387 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 B3GNT6Q6ZMB0 384 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 ARPINQ7Z6K5 226 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 KRT73Q86Y46 540 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 ZNF440Q8IYI8 595 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 RP9Q8TA86 221 aaKnown RBP13.29□□□□□ -0.28
LIMS1-206ENST00000414829 BBS10Q8TAM1 723 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 CGREF1Q99674 301 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 CPPED1Q9BRF8 314 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-206ENST00000414829 SPATA9Q9BWV2 254 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 SLC38A1Q9H2H9 487 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 TMEM38AQ9H6F2 299 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 EXOSC3Q9NQT5 275 aaKnown RBP13.29□□□□□ -0.28
LIMS1-206ENST00000414829 SLC25A37Q9NYZ2 338 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 VAPAQ9P0L0 249 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 SH3BGRL2Q9UJC5 107 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 ERRFI1Q9UJM3 462 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-206ENST00000414829 AP3M1Q9Y2T2 418 aa13.29□□□□□ -0.28
LIMS1-206ENST00000414829 GPC6Q9Y625 555 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-206ENST00000414829 HELZ2Q9BYK8 2649 aaKnown RBP13.29□□□□□ -0.28
LIMS1-206ENST00000414829 MRASO14807 208 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 FCMRO60667 390 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 TNFRSF21O75509 655 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 DCTN3O75935 186 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 THBS1P07996 1170 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 CHRM4P08173 479 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 TFPTP0C1Z6 253 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 PEPDP12955 493 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 CPN1P15169 458 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 IL7RP16871 459 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 BMP7P18075 431 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 GPX2P18283 190 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 POU3F2P20265 443 aaPredicted RBP13.28□□□□□ -0.28
LIMS1-206ENST00000414829 ADH6P28332 368 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 GFRA1P56159 465 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 ZNF117Q03924 483 aa13.28□□□□□ -0.28
LIMS1-206ENST00000414829 RBBP4Q09028 425 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms