RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PRODH2Q9UF12 536 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 BCAP29Q9UHQ4 241 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 MOSPD1Q9UJG1 213 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 FZR1Q9UM11 496 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 ADAMTSL1Q8N6G6 1762 aa2.78□□□□□ -1.96
HMGB1P11-201ENST00000413899 KIAA1217Q5T5P2 1943 aa2.78□□□□□ -1.97
HMGB1P11-201ENST00000413899 NOTCH3Q9UM47 2321 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 BCL9LQ86UU0 1499 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 BCL9O00512 1426 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 RIC1Q4ADV7 1423 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 JCADQ9P266 1359 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 UBE4BO95155 1302 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 G3V3Y1 287 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 SDC3O75056 442 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 SLC35G4P0C7Q5 338 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 RFC2P35250 354 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 XCR1P46094 333 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 POU3F4P49335 361 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 NOP14P78316 857 aaKnown RBP2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 ZP4Q12836 540 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 PDIA5Q14554 519 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 PKN2Q16513 984 aaKnown RBP2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 GSG1Q2KHT4 349 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 TTC31Q49AM3 519 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 PAN3Q58A45 887 aaKnown RBP2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 FHL5Q5TD97 284 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 LGSNQ5TDP6 509 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 OR6B2Q6IFH4 312 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 HACD2Q6Y1H2 254 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 UNC5CLQ8IV45 518 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 CCDC36Q8IYA8 594 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 ELMOD2Q8IZ81 293 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 C11orf42Q8N5U0 333 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 ARFGAP2Q8N6H7 521 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 RNF148Q8N7C7 305 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 SLC25A36Q96CQ1 311 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 CNOT6LQ96LI5 555 aaKnown RBP2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 ANP32EQ9BTT0 268 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 NMNAT2Q9BZQ4 307 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 IKZF5Q9H5V7 419 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 FAM114A2Q9NRY5 505 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 ZNF275Q9NSD4 429 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 CNOT2Q9NZN8 540 aaKnown RBP2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 DPM3Q9P2X0 92 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 B4GALT7Q9UBV7 327 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 IL20RAQ9UHF4 553 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 PLEKHA6Q9Y2H5 1048 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 FKBP7Q9Y680 259 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 MYH2Q9UKX2 1941 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 PSME4Q14997 1843 aa2.77□□□□□ -1.97
HMGB1P11-201ENST00000413899 ZNF609O15014 1411 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 USP42Q9H9J4 1324 aaKnown RBP2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 NAV1Q8NEY1 1877 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 IMPA2O14732 288 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 TM9SF1O15321 606 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 ADAM12O43184 909 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 NUDT21O43809 227 aaKnown RBP2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 SSX5O60225 188 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 SLC2A10O95528 541 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 ZCCHC18P0CG32 403 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 SLC35E2P0CK97 266 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 CCDC192P0DO97 292 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 RALAP11233 206 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 KLK2P20151 261 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 AKT2P31751 481 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 RAG2P55895 527 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 ERVPABLB-1P60509 514 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 MRPS6P82932 125 aaKnown RBP2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 FUT7Q11130 342 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 WASHC5Q12768 1159 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 KIAA0040Q15053 153 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 PDK1Q15118 436 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 TAF7Q15545 349 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 QRICH1Q2TAL8 776 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 CYBRD1Q53TN4 286 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 BEND3Q5T5X7 828 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 TATDN1Q6P1N9 297 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 ZNF562Q6V9R5 426 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 NET1Q7Z628 596 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 C11orf53Q8IXP5 236 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 CENPSQ8N2Z9 138 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 KDM8Q8N371 416 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 MRPL43Q8N983 215 aaKnown RBP2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 MINDY2Q8NBR6 621 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 NCLNQ969V3 563 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 FAF2Q96CS3 445 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 C14orf79Q96F83 325 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 OR5M11Q96RB7 305 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 CARD6Q9BX69 1037 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 TNMDQ9H2S6 317 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 DCAF13Q9NV06 445 aaKnown RBP2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 KLRF1Q9NZS2 232 aa2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 BARX2Q9UMQ3 279 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 EXOSC1Q9Y3B2 195 aaKnown RBP2.76□□□□□ -1.97
HMGB1P11-201ENST00000413899 CCDC88AQ3V6T2 1871 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 GRIN2DO15399 1336 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 PCDH11XQ9BZA7 1347 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 KLF18A0A0U1RQI7 1052 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 H3BTX0 84 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms