RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SCP2D1Q9UJQ7 156 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 LRRK1Q38SD2 2015 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 UNC119BA6NIH7 251 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 CDC42EP2O14613 210 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 GPR171O14626 319 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 CCL16O15467 120 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 HYAL3O43820 417 aaPredicted RBP16.42■□□□□ 0.22
SDCBP-202ENST00000413219 PQBP1O60828 265 aaKnown RBP16.42■□□□□ 0.22
SDCBP-202ENST00000413219 H2AFB2P0C5Z0 115 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 ZGLP1P0C6A0 271 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 UBL4AP11441 157 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 HIST1H1TP22492 207 aaPredicted RBP16.42■□□□□ 0.22
SDCBP-202ENST00000413219 MPIP34949 423 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 PTGER1P34995 402 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 AHRP35869 848 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 OR10A3P58181 314 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 PRDX1Q06830 199 aaKnown RBP16.42■□□□□ 0.22
SDCBP-202ENST00000413219 TEAD2Q15562 447 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 CEBPEQ15744 281 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 PRPF38BQ5VTL8 546 aaKnown RBP16.42■□□□□ 0.22
SDCBP-202ENST00000413219 SLC48A1Q6P1K1 146 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 CNKSR3Q6P9H4 555 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 ADAMTSL4Q6UY14 1074 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 ERN2Q76MJ5 926 aaKnown RBP16.42■□□□□ 0.22
SDCBP-202ENST00000413219 CEACAM19Q7Z692 300 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 SLC51BQ86UW2 128 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 SIAH3Q8IW03 269 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 LSMEM1Q8N8F7 131 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 NXPE2Q96DL1 559 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 TCEAL4Q96EI5 215 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 ACTRT3Q9BYD9 372 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 TMEM168Q9H0V1 697 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 UBQLN2Q9UHD9 624 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 NTNG1Q9Y2I2 539 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 ATG4BQ9Y4P1 393 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 IRAK3Q9Y616 596 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 NPTNQ9Y639 398 aa16.42■□□□□ 0.22
SDCBP-202ENST00000413219 SLC22A31A6NKX4 558 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 I3L521 148 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 GSTZ1O43708 216 aaPredicted RBP16.41■□□□□ 0.22
SDCBP-202ENST00000413219 OR7A10O76100 309 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 AIFM1O95831 613 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 F3P13726 295 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 GIFP27352 417 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 PPM1AP35813 382 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 EPHA4P54764 986 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 DYRK1AQ13627 763 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 ZNF750Q32MQ0 723 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 LGALSLQ3ZCW2 172 aaPredicted RBP16.41■□□□□ 0.22
SDCBP-202ENST00000413219 SLC22A10Q63ZE4 541 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 HEPHL1Q6MZM0 1159 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 SLC44A3Q8N4M1 653 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 LINC01555Q8NAE3 123 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 OR52L1Q8NGH7 329 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 KISS1RQ969F8 398 aaPredicted RBP16.41■□□□□ 0.22
SDCBP-202ENST00000413219 ELP4Q96EB1 424 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 OR52D1Q9H346 318 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 KLHL31Q9H511 634 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 DLL4Q9NR61 685 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 HCFC1R1Q9NWW0 138 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 ABRACLQ9P1F3 81 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 IL20RAQ9UHF4 553 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 ZNF443Q9Y2A4 671 aaPredicted RBP16.41■□□□□ 0.22
SDCBP-202ENST00000413219 WNT6Q9Y6F9 365 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 TRAV1-2A0A0B4J238 106 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 IGKV1-8A0A0C4DH67 115 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 TUBAL3A6NHL2 446 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 DUXAA6NLW8 204 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 BHLHE40O14503 412 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 MOSPD3O75425 235 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 CISD3P0C7P0 127 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 ADRB3P13945 408 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 DNASE1P24855 282 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 ATP5A1P25705 553 aaKnown RBP16.41■□□□□ 0.22
SDCBP-202ENST00000413219 WEE1P30291 646 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 MC3RP41968 323 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 CLCNKAP51800 687 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 TAGLNQ01995 201 aaKnown RBP16.41■□□□□ 0.22
SDCBP-202ENST00000413219 EXOSC2Q13868 293 aaKnown RBP16.41■□□□□ 0.22
SDCBP-202ENST00000413219 ABHD17CQ6PCB6 329 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 COMMD7Q86VX2 200 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 LNX2Q8N448 690 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 MS4A15Q8N5U1 240 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 DTX3Q8N9I9 347 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 ACOT4Q8N9L9 421 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 OR56B4Q8NH76 319 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 MS4A6EQ96DS6 147 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 PRDM7Q9NQW5 492 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 RABL2AQ9UBK7 228 aaPredicted RBP16.41■□□□□ 0.22
SDCBP-202ENST00000413219 RABL2BQ9UNT1 228 aa16.41■□□□□ 0.22
SDCBP-202ENST00000413219 LOC105369274A0A096LPK9 316 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 LRRN3E7EW58 273 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 RFXAPO00287 272 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 CTDSPLO15194 276 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 ERI3O43414 337 aaKnown RBP16.4■□□□□ 0.22
SDCBP-202ENST00000413219 ZIC2O95409 532 aaPredicted RBP16.4■□□□□ 0.22
SDCBP-202ENST00000413219 SAGP10523 405 aaPredicted RBP16.4■□□□□ 0.22
SDCBP-202ENST00000413219 RAB3BP20337 219 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 MFSD13AQ14CX5 517 aa16.4■□□□□ 0.22
SDCBP-202ENST00000413219 ST3GAL2Q16842 350 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms