RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CHMP6Q96FZ7 201 aa13.25□□□□□ -0.29
CBX3-203ENST00000409747 GMPPAQ96IJ6 420 aaPredicted RBP13.25□□□□□ -0.29
CBX3-203ENST00000409747 WFIKKN1Q96NZ8 548 aa13.25□□□□□ -0.29
CBX3-203ENST00000409747 PRPF18Q99633 342 aaKnown RBP13.25□□□□□ -0.29
CBX3-203ENST00000409747 ROPN1BQ9BZX4 212 aaPredicted RBP13.25□□□□□ -0.29
CBX3-203ENST00000409747 ROPN1Q9HAT0 212 aaPredicted RBP13.25□□□□□ -0.29
CBX3-203ENST00000409747 GLRX2Q9NS18 164 aa13.25□□□□□ -0.29
CBX3-203ENST00000409747 MED17Q9NVC6 651 aa13.25□□□□□ -0.29
CBX3-203ENST00000409747 SNX8Q9Y5X2 465 aa13.25□□□□□ -0.29
CBX3-203ENST00000409747 SHISA8B8ZZ34 492 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 EIF1P41567 113 aaKnown RBP13.24□□□□□ -0.29
CBX3-203ENST00000409747 CTBP2P56545 445 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 RAC1P63000 192 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 PLPPR5Q32ZL2 321 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 LSM12Q3MHD2 195 aaKnown RBP13.24□□□□□ -0.29
CBX3-203ENST00000409747 EXOSC6Q5RKV6 272 aaKnown RBP13.24□□□□□ -0.29
CBX3-203ENST00000409747 CPTPQ5TA50 214 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 ESPNLQ6ZVH7 1005 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 MTERF4Q7Z6M4 381 aaKnown RBP13.24□□□□□ -0.29
CBX3-203ENST00000409747 GATSQ8NAP1 163 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 OR56A1Q8NGH5 318 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 OR10D3Q8NH80 312 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 AGR3Q8TD06 166 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 TCP10LQ8TDR4 215 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 OR5P2Q8WZ92 322 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 MOAP1Q96BY2 351 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 MECRQ9BV79 373 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 ANKZF1Q9H8Y5 726 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 DLL4Q9NR61 685 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 SIRT3Q9NTG7 399 aaPredicted RBP13.24□□□□□ -0.29
CBX3-203ENST00000409747 C6orf203Q9P0P8 240 aaPredicted RBP13.24□□□□□ -0.29
CBX3-203ENST00000409747 SLC17A7Q9P2U7 560 aa13.24□□□□□ -0.29
CBX3-203ENST00000409747 FLNAP21333 2647 aaKnown RBP13.23□□□□□ -0.29
CBX3-203ENST00000409747 A0A1W2PPR1 153 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 SS18L1O75177 396 aaPredicted RBP13.23□□□□□ -0.29
CBX3-203ENST00000409747 PEX11AO75192 247 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 AQP8O94778 261 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 HMGN2P05204 90 aaKnown RBP13.23□□□□□ -0.29
CBX3-203ENST00000409747 PPP3CBP16298 524 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 CCKARP32238 428 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 LASP1Q14847 261 aaKnown RBP13.23□□□□□ -0.29
CBX3-203ENST00000409747 SHEQ5VZ18 495 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 CDC73Q6P1J9 531 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 ZNF610Q8N9Z0 462 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 FNDC5Q8NAU1 212 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 OR7A2PQ8NGA2 310 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 B4GALNT2Q8NHY0 566 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 PIGTQ969N2 578 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 PIK3IP1Q96FE7 263 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 C16orf58Q96GQ5 468 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 SH3YL1Q96HL8 342 aaPredicted RBP13.23□□□□□ -0.29
CBX3-203ENST00000409747 RNF145Q96MT1 663 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 PIP5K1AQ99755 562 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 ACTRT3Q9BYD9 372 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 HOXD1Q9GZZ0 328 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 PIGUQ9H490 435 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 FAF1Q9UNN5 650 aaPredicted RBP13.23□□□□□ -0.29
CBX3-203ENST00000409747 NIPBLQ6KC79 2804 aaeCLIP13.23□□□□□ -0.29
CBX3-203ENST00000409747 PCNX3Q9H6A9 2034 aa13.23□□□□□ -0.29
CBX3-203ENST00000409747 DEFB108AA8MXU0 73 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 H3BNH8 94 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 ADAMDEC1O15204 470 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 ARHGEF9O43307 516 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 SPAG7O75391 227 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 EFNA1P20827 205 aaPredicted RBP13.22□□□□□ -0.29
CBX3-203ENST00000409747 FPR1P21462 350 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 HOXC12P31275 282 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 PTGR1Q14914 329 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 SPDYE7PQ495Y7 208 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 GTF2IRD2BQ6EKJ0 949 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 BHLHB9Q6PI77 547 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 ZCCHC23Q6ZST2 131 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 ZAR1Q86SH2 424 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 GTF2IRD2Q86UP8 949 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 STK32CQ86UX6 486 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 OR2V1Q8NHB1 315 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 PSMA8Q8TAA3 256 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 SFXN5Q8TD22 340 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 CDS1Q92903 461 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 OTUB1Q96FW1 271 aaPredicted RBP13.22□□□□□ -0.29
CBX3-203ENST00000409747 ADGRG7Q96K78 797 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 PLSCR4Q9NRQ2 329 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 SLU7O95391 586 aaKnown RBP13.22□□□□□ -0.29
CBX3-203ENST00000409747 PABPC4LP0CB38 370 aaKnown RBP13.22□□□□□ -0.29
CBX3-203ENST00000409747 LAMP1P11279 417 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 IL11P20809 199 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 PRPS1L1P21108 318 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 PSMA4P25789 261 aaKnown RBP13.22□□□□□ -0.29
CBX3-203ENST00000409747 ELK4P28324 431 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 SLC6A8P48029 635 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 CCT3P49368 545 aaKnown RBP13.22□□□□□ -0.29
CBX3-203ENST00000409747 SUMO3P55854 103 aaPredicted RBP13.22□□□□□ -0.29
CBX3-203ENST00000409747 NKX6-1P78426 367 aaPredicted RBP13.22□□□□□ -0.29
CBX3-203ENST00000409747 MAD2L1Q13257 205 aaPredicted RBP13.22□□□□□ -0.29
CBX3-203ENST00000409747 TP53BP2Q13625 1128 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 CTU2Q2VPK5 515 aaKnown RBP13.22□□□□□ -0.29
CBX3-203ENST00000409747 C6orf136Q5SQH8 315 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 CCNJQ5T5M9 372 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 HBMQ6B0K9 141 aa13.22□□□□□ -0.29
CBX3-203ENST00000409747 EMBQ6PCB8 327 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 188.2 ms