RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 MTERF4Q7Z6M4 381 aaKnown RBP16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 RNF130Q86XS8 419 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 LACC1Q8IV20 430 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 ZNF614Q8N883 585 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 ZPLD1Q8TCW7 415 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 VPS33AQ96AX1 596 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 ITCHQ96J02 903 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 Q9UFV3 132 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 VDAC3Q9Y277 283 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 ZNF337Q9Y3M9 751 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 UNC79Q9P2D8 2635 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 OR2M5A3KFT3 312 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 FAM90A27PA6NNH2 459 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 CYSRT1A8MQ03 144 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 LINC01387J3KSC0 135 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 GTPBP1O00178 669 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 HCRTR2O43614 444 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 POU3F2P20265 443 aaPredicted RBP16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 MRPL19P49406 292 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 BCL2A1Q16548 175 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.23■□□□□ 0.193e-8■■■■■ 44.2
PDLIM2-206ENST00000409141 HEPHL1Q6MZM0 1159 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 OLIG3Q7RTU3 272 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 ARFGAP2Q8N6H7 521 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 B4GALNT2Q8NHY0 566 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 TUBA1CQ9BQE3 449 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 UCK2Q9BZX2 261 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 NMUR2Q9GZQ4 415 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 CALHM2Q9HA72 323 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 KCNJ16Q9NPI9 418 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 MKLN1Q9UL63 735 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 DTNAQ9Y4J8 743 aa16.23■□□□□ 0.19
PDLIM2-206ENST00000409141 A0A087WZY1 265 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 CD8B2A6NJW9 211 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 HSPB2A8KAH6 182 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 NPIPB9F8W1W9 429 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 TOXO94900 526 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 KRT75O95678 551 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 IL2RAP01589 272 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 PEPDP12955 493 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 ZNF708P17019 499 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 TIMP3P35625 211 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 ANXA11P50995 505 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 ZNF41P51814 821 aaPredicted RBP16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 CLDN18P56856 261 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 HSPB2Q16082 182 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 C6orf10Q5SRN2 563 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 DNAJC14Q6Y2X3 702 aaPredicted RBP16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 UBQLNLQ8IYU4 475 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 TNIP2Q8NFZ5 429 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 PNPT1Q8TCS8 783 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 ROPN1LQ96C74 230 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 ZNF350Q9GZX5 532 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 NPHS2Q9NP85 383 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 SLC6A13Q9NSD5 602 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 DCTN4Q9UJW0 460 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 CARD8Q9Y2G2 431 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 PCNX3Q9H6A9 2034 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 NKX2-6A6NCS4 301 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 SHISA8B8ZZ34 492 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 H3BML4 177 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 HMGN4O00479 90 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 TXNL4AP83876 142 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 ZNF117Q03924 483 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 GPAT3Q53EU6 434 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 PDZK1Q5T2W1 519 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 CHMP1BQ7LBR1 199 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 MEIOBQ8N635 442 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 RFWD2Q8NHY2 731 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 POLE3Q9NRF9 147 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 MED17Q9NVC6 651 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 CCDC167Q9P0B6 97 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 KCNE5Q9UJ90 142 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 WDR45Q9Y484 360 aa16.22■□□□□ 0.19
PDLIM2-206ENST00000409141 CLCA1A8K7I4 914 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 C19orf84I3L1E1 186 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 OIP5O43482 229 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 TNFRSF21O75509 655 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 NUDT14O95848 222 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 ZCCHC18P0CG32 403 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 NCF2P19878 526 aaPredicted RBP16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 CEACAM8P31997 349 aaPredicted RBP16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 ATP4BP51164 291 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 ZNF141Q15928 474 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 TMEM44Q2T9K0 475 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 COX20Q5RI15 118 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 SLC2A7Q6PXP3 512 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 BLOC1S3Q6QNY0 202 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 CBLN3Q6UW01 205 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 LIX1LQ8IVB5 337 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 ZFP90Q8TF47 636 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 ZBTB8AQ96BR9 441 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 SIKE1Q9BRV8 207 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 MED4Q9NPJ6 270 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 STOML1Q9UBI4 398 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 CACNA1CQ13936 2221 aa16.21■□□□□ 0.19
PDLIM2-206ENST00000409141 A0A0G2JND7 137 aa16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 MBD3L4A6NDZ8 208 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 MBD3L3A6NE82 208 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-206ENST00000409141 SERINC4A6NH21 518 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms