RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 UBTFL6P0CB48 400 aaPredicted RBP18.76■□□□□ 0.59
CHKB-201ENST00000406938 FCGR1AP12314 374 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 RGS8P57771 180 aaPredicted RBP18.76■□□□□ 0.59
CHKB-201ENST00000406938 DEF8Q6ZN54 512 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 CCDC81Q6ZN84 652 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 PIWIL3Q7Z3Z3 882 aaKnown RBP18.76■□□□□ 0.59
CHKB-201ENST00000406938 MARCH3Q86UD3 253 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 PHOSPHO1Q8TCT1 267 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 RNF138Q8WVD3 245 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 CNOT9Q92600 299 aaKnown RBP18.76■□□□□ 0.59
CHKB-201ENST00000406938 PKP2Q99959 881 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 AGPAT4Q9NRZ5 378 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 ANKRD10Q9NXR5 420 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 GPR83Q9NYM4 423 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 STMN3Q9NZ72 180 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 SLC35A3Q9Y2D2 325 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 CHCHD2Q9Y6H1 151 aaPredicted RBP18.76■□□□□ 0.59
CHKB-201ENST00000406938 CFAP47Q6ZTR5 3102 aa18.76■□□□□ 0.59
CHKB-201ENST00000406938 H3BNH8 94 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 TP53I11O14683 189 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 DIRAS1O95057 198 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 UBL4AP11441 157 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 FASP25445 335 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 ADH7P40394 386 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 NPTX1Q15818 432 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 BICRALQ6AI39 1079 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 GRAMD2AQ8IUY3 354 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 PQLC1Q8N2U9 271 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 FAM71CQ8NEG0 241 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 RIMS3Q9UJD0 308 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 ENPP4Q9Y6X5 453 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 NCOR2Q9Y618 2525 aa18.75■□□□□ 0.59
CHKB-201ENST00000406938 C17orf51A8MQB3 221 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 ADAM10O14672 748 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 NDUFB5O43674 189 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 ANGPTL1O95841 491 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 CST1P01037 141 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 GKN3PP0CG01 181 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 ITGA2P17301 1181 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 YAP1P46937 504 aaKnown RBP18.74■□□□□ 0.59
CHKB-201ENST00000406938 HOXC5Q00444 222 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 ATP6AP1Q15904 470 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 ZSWIM7Q19AV6 140 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 HMBOX1Q6NT76 420 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 CYP4Z2PQ8N1L4 340 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 ARSGQ96EG1 525 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 ZNF300Q96RE9 604 aaPredicted RBP18.74■□□□□ 0.59
CHKB-201ENST00000406938 METTL7AQ9H8H3 244 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 GALNT9Q9HCQ5 603 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 KLRF1Q9NZS2 232 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 ABI3Q9P2A4 366 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 KCNMB2Q9Y691 235 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 DOCK10Q96BY6 2186 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 J3KTA2 159 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 SEMA7AO75326 666 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 CYP7B1O75881 506 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 PRG2P13727 222 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 ZNF136P52737 540 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 SESN3P58005 492 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 TLE3Q04726 772 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 SKP2Q13309 424 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 AGAP7PQ5VUJ5 663 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 LINC00696Q6ZRV3 163 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 AMIGO2Q86SJ2 522 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 AGAP4Q96P64 663 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 SH2D2AQ9NP31 389 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 C6orf203Q9P0P8 240 aaPredicted RBP18.74■□□□□ 0.59
CHKB-201ENST00000406938 RAXQ9Y2V3 346 aa18.74■□□□□ 0.59
CHKB-201ENST00000406938 MED19A0JLT2 244 aaPredicted RBP18.73■□□□□ 0.59
CHKB-201ENST00000406938 C1QTNF9BB2RNN3 333 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 GTPBP1O00178 669 aaKnown RBP18.73■□□□□ 0.59
CHKB-201ENST00000406938 CLOCKO15516 846 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 ZNF264O43296 627 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 OIP5O43482 229 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 TPST2O60704 377 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 ADAM11O75078 769 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 DEAF1O75398 565 aaPredicted RBP18.73■□□□□ 0.59
CHKB-201ENST00000406938 F10P00742 488 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 LDLRP01130 860 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 C1QTNF9P0C862 333 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 PTGDSP41222 190 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 CYB561P49447 251 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 CLK3P49761 638 aaKnown RBP18.73■□□□□ 0.59
CHKB-201ENST00000406938 HLCSP50747 726 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 CCL11P51671 97 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 RPP38P78345 283 aaKnown RBP18.73■□□□□ 0.59
CHKB-201ENST00000406938 RTL4Q6ZR62 310 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 GPALPP1Q8IXQ4 340 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 PAQR8Q8TEZ7 354 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 PHF10Q8WUB8 498 aaKnown RBP18.73■□□□□ 0.59
CHKB-201ENST00000406938 SECISBP2Q96T21 854 aaKnown RBP18.73■□□□□ 0.59
CHKB-201ENST00000406938 SEMA6AQ9H2E6 1030 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 CARD8Q9Y2G2 431 aa18.73■□□□□ 0.59
CHKB-201ENST00000406938 MED13Q9UHV7 2174 aa18.72■□□□□ 0.59
CHKB-201ENST00000406938 CCL3P10147 92 aa18.72■□□□□ 0.59
CHKB-201ENST00000406938 CASRP41180 1078 aa18.72■□□□□ 0.59
CHKB-201ENST00000406938 CASP3P42574 277 aa18.72■□□□□ 0.59
CHKB-201ENST00000406938 GAS1P54826 345 aa18.72■□□□□ 0.59
CHKB-201ENST00000406938 OC90Q02509 493 aaPredicted RBP18.72■□□□□ 0.59
CHKB-201ENST00000406938 ZNF117Q03924 483 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms