RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 M1APQ8TC57 530 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 ANKRD7Q92527 254 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 PELI1Q96FA3 418 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 PRICKLE1Q96MT3 831 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 CCDC77Q9BR77 488 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 NFKBIZQ9BYH8 718 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 OCR1Q9BZK8 76 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 CTAGE15A4D2H0 777 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 HELTA6NFD8 242 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZNF716A6NP11 495 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 NPIPA7E9PJI5 369 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 SGK1O00141 431 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 NUDT14O95848 222 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 IGHV3-9P01782 118 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZNF735P0CB33 412 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 NPIPA8P0DM63 369 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 DBTP11182 482 aaKnown RBP3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 TOP1P11387 765 aaKnown RBP3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 GANABQ14697 944 aaKnown RBP3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 SIX1Q15475 284 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 PCK2Q16822 640 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 IMMTQ16891 758 aaKnown RBP3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 ACER2Q5QJU3 275 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 DCST2Q5T1A1 773 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZC2HC1BQ5TFG8 222 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 HHATQ5VTY9 493 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 SLX4IPQ5VYV7 408 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 FAM219BQ5XKK7 198 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 RUFY3Q7L099 469 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 CEACAM19Q7Z692 300 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 CTAGE6Q86UF2 777 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 SUMF1Q8NBK3 374 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZNF671Q8TAW3 534 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 LRRC15Q8TF66 581 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 GTF3AQ92664 365 aaKnown RBP3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 RAB3CQ96E17 227 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 CNOT6LQ96LI5 555 aaKnown RBP3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 METTL7AQ9H8H3 244 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 ELL3Q9HB65 397 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 CRLF2Q9HC73 371 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 MEPEQ9NQ76 525 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 THEGQ9P2T0 379 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 ASIC3Q9UHC3 531 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 NPIPA1Q9UND3 350 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 PNPLA6Q8IY17 1366 aa3.98□□□□□ -1.77
HMGB1P13-201ENST00000406019 IGLV4-3A0A075B6K6 122 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 C11orf98E9PRG8 122 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 TPST2O60704 377 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 RHBDL1O75783 438 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 SEMA4FO95754 770 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 F10P00742 488 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 SERPINA3P01011 423 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 IGHG3P01860 377 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 SERPINB2P05120 415 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 HBQ1P09105 142 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 PPP2R1BP30154 601 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 HPCAL1P37235 193 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 SLC1A4P43007 532 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 CCT3P49368 545 aaKnown RBP3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 CASP4P49662 377 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 CSRP3P50461 194 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 MFAP2P55001 183 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 ATP5IP56385 69 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 ERVK11-1P61568 191 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 PLOD1Q02809 727 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 ACY1Q03154 408 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 FGL1Q08830 312 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 NECTIN1Q15223 517 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZIC1Q15915 447 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 TTC19Q6DKK2 380 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 ACSM5Q6NUN0 579 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 PRSS48Q7RTY5 328 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 ACOT1Q86TX2 421 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 PHC2Q8IXK0 858 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 TRIML2Q8N7C3 387 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 MAPK1IP1LQ8NDC0 245 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 OR1F12Q8NHA8 337 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 AKR7LQ8NHP1 331 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 BADQ92934 168 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 TADA1Q96BN2 335 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 C12orf66Q96MD2 445 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 SLC6A7Q99884 636 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 CCDC28BQ9BUN5 200 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 RNF41Q9H4P4 317 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 SP140LQ9H930 580 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZDHHC18Q9NUE0 388 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZNF221Q9UK13 617 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 CDH9Q9ULB4 789 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 MGAT4AQ9UM21 535 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 RASD1Q9Y272 281 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 KANK1Q14678 1352 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 ATP10AO60312 1499 aa3.97□□□□□ -1.77
HMGB1P13-201ENST00000406019 FRMPD4Q14CM0 1322 aa3.96□□□□□ -1.77
HMGB1P13-201ENST00000406019 RAD50Q92878 1312 aa3.96□□□□□ -1.77
HMGB1P13-201ENST00000406019 TEX48A0A1B0GUV7 120 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 PCP4L1A6NKN8 68 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 OR52A4PA6NMU1 304 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 KRTAP16-1A8MUX0 517 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 NBR2O15453 112 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 SRPX2O60687 465 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms