RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 RASSF1Q9NS23 344 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 OR6C76A6NM76 312 aa23.62■■□□□ 1.37
CPNE1-205ENST00000401607 WBP4O75554 376 aaKnown RBP23.62■■□□□ 1.37
CPNE1-205ENST00000401607 SOX14O95416 240 aa23.62■■□□□ 1.37
CPNE1-205ENST00000401607 CCDC159P0C7I6 412 aa23.62■■□□□ 1.37
CPNE1-205ENST00000401607 FMO3P31513 532 aa23.62■■□□□ 1.37
CPNE1-205ENST00000401607 ALDH3B2P48448 385 aa23.62■■□□□ 1.37
CPNE1-205ENST00000401607 NUBP1P53384 320 aa23.62■■□□□ 1.37
CPNE1-205ENST00000401607 EMP2P54851 167 aa23.62■■□□□ 1.37
CPNE1-205ENST00000401607 TMEM236Q5W0B7 351 aa23.62■■□□□ 1.37
CPNE1-205ENST00000401607 NFAM1Q8NET5 270 aaPredicted RBP23.62■■□□□ 1.37
CPNE1-205ENST00000401607 TOR1AIP2Q8NFQ8 470 aa23.62■■□□□ 1.37
CPNE1-205ENST00000401607 SERINC4A6NH21 518 aa23.61■■□□□ 1.37
CPNE1-205ENST00000401607 ACAA2P42765 397 aaKnown RBP23.61■■□□□ 1.37
CPNE1-205ENST00000401607 OMPP47874 163 aa23.61■■□□□ 1.37
CPNE1-205ENST00000401607 GABARAPL2P60520 117 aa23.61■■□□□ 1.37
CPNE1-205ENST00000401607 COX10Q12887 443 aa23.61■■□□□ 1.37
CPNE1-205ENST00000401607 KLHL26Q53HC5 615 aa23.61■■□□□ 1.37
CPNE1-205ENST00000401607 LSRQ86X29 649 aaPredicted RBP23.61■■□□□ 1.37
CPNE1-205ENST00000401607 MEX3DQ86XN8 651 aaKnown RBP23.61■■□□□ 1.37
CPNE1-205ENST00000401607 CMIPQ8IY22 773 aa23.61■■□□□ 1.37
CPNE1-205ENST00000401607 ZNF441Q8N8Z8 693 aa23.61■■□□□ 1.37
CPNE1-205ENST00000401607 BPIFB6Q8NFQ5 453 aa23.61■■□□□ 1.37
CPNE1-205ENST00000401607 TMEM255BQ8WV15 326 aa23.61■■□□□ 1.37
CPNE1-205ENST00000401607 LRFN5Q96NI6 719 aa23.61■■□□□ 1.37
CPNE1-205ENST00000401607 ZNF559Q9BR84 538 aa23.61■■□□□ 1.37
CPNE1-205ENST00000401607 ZNF223Q9UK11 482 aaPredicted RBP23.61■■□□□ 1.37
CPNE1-205ENST00000401607 CDC14CA4D256 554 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 SAGE2PA6NJ88 616 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 TO15178 435 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 XPNPEP2O43895 674 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 IDH2P48735 452 aaKnown RBP23.6■■□□□ 1.37
CPNE1-205ENST00000401607 CXCR4P61073 352 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 ZSWIM7Q19AV6 140 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 ZNF773Q6PK81 442 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 WDR88Q6ZMY6 472 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 SLC29A4Q7RTT9 530 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 SLCO6A1Q86UG4 719 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 METTL21AQ8WXB1 218 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 SLC35B4Q969S0 331 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 FAM192AQ9GZU8 254 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 PAK1IP1Q9NWT1 392 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-205ENST00000401607 SLC39A1Q9NY26 324 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 ZNF226Q9NYT6 803 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 BLOC1S6Q9UL45 172 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 B4E171 279 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 EEF1B2P24534 225 aaKnown RBP23.6■■□□□ 1.37
CPNE1-205ENST00000401607 POU1F1P28069 291 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 SLC5A2P31639 672 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 IFNGR2P38484 337 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 TSPAN7P41732 249 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 NR0B1P51843 470 aaKnown RBP23.6■■□□□ 1.37
CPNE1-205ENST00000401607 ALDH6A1Q02252 535 aaKnown RBP23.6■■□□□ 1.37
CPNE1-205ENST00000401607 SMN1Q16637 294 aaKnown RBP23.6■■□□□ 1.37
CPNE1-205ENST00000401607 HLA-DQA1Q5Y7H0 255 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 MBOAT2Q6ZWT7 520 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 PRR22Q8IZ63 422 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 B3GNT7Q8NFL0 401 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 GNPDA2Q8TDQ7 276 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 WDR77Q9BQA1 342 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-205ENST00000401607 CRB3Q9BUF7 120 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 SEMA4CQ9C0C4 833 aa23.6■■□□□ 1.37
CPNE1-205ENST00000401607 PIP5K1CO60331 668 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 GABRB1P18505 474 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 ITIH1P19827 911 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 SPEM2Q0P670 501 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 NDUFAF6Q330K2 333 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 CCDC157Q569K6 752 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 FNDC7Q5VTL7 733 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 FAM199XQ6PEV8 388 aaPredicted RBP23.59■■□□□ 1.37
CPNE1-205ENST00000401607 DEPDC4Q8N2C3 294 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 APCDD1LQ8NCL9 501 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 RHOXF1Q8NHV9 184 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 PIGXQ8TBF5 258 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 FAM46AQ96IP4 442 aaKnown RBP23.59■■□□□ 1.37
CPNE1-205ENST00000401607 CMKLR1Q99788 373 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 HOXD1Q9GZZ0 328 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 TMEM9BQ9NQ34 198 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 UBQLN4Q9NRR5 601 aa23.59■■□□□ 1.37
CPNE1-205ENST00000401607 PPIEQ9UNP9 301 aaKnown RBP23.59■■□□□ 1.37
CPNE1-205ENST00000401607 ABCB7O75027 752 aa23.58■■□□□ 1.37
CPNE1-205ENST00000401607 HTR1AP08908 422 aa23.58■■□□□ 1.37
CPNE1-205ENST00000401607 GSTM3P21266 225 aa23.58■■□□□ 1.37
CPNE1-205ENST00000401607 KRT20P35900 424 aa23.58■■□□□ 1.37
CPNE1-205ENST00000401607 ZNF613Q6PF04 617 aa23.58■■□□□ 1.37
CPNE1-205ENST00000401607 TMEM205Q6UW68 189 aa23.58■■□□□ 1.37
CPNE1-205ENST00000401607 CCDC103Q8IW40 242 aa23.58■■□□□ 1.37
CPNE1-205ENST00000401607 NRMQ8IXM6 262 aa23.58■■□□□ 1.37
CPNE1-205ENST00000401607 OIT3Q8WWZ8 545 aa23.58■■□□□ 1.37
CPNE1-205ENST00000401607 ULBP3Q9BZM4 244 aa23.58■■□□□ 1.37
CPNE1-205ENST00000401607 WDR54Q9H977 334 aa23.58■■□□□ 1.37
CPNE1-205ENST00000401607 CNIH4Q9P003 139 aa23.58■■□□□ 1.37
CPNE1-205ENST00000401607 MRTO4Q9UKD2 239 aaKnown RBP23.58■■□□□ 1.37
CPNE1-205ENST00000401607 H3BN98 237 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 M0R129 80 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 OR6B1O95007 311 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 UTS2O95399 124 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 CSTAP01040 98 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 TSPAN31Q12999 210 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 SLX4IPQ5VYV7 408 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms