RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 PSMA4P25789 261 aaKnown RBP6.85□□□□□ -1.31
USP16-204ENST00000399976 LY6DQ14210 128 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 ZNF239Q16600 458 aaKnown RBP6.85□□□□□ -1.31
USP16-204ENST00000399976 CMPK2Q5EBM0 449 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 SAMD4BQ5PRF9 694 aaKnown RBP6.85□□□□□ -1.31
USP16-204ENST00000399976 FCRLBQ6BAA4 426 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 ARHGAP11AQ6P4F7 1023 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 TRPM8Q7Z2W7 1104 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 YTHDF3Q7Z739 585 aaKnown RBP6.85□□□□□ -1.31
USP16-204ENST00000399976 ADGRE4PQ86SQ3 457 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 FAM13CQ8NE31 585 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 B4GALNT2Q8NHY0 566 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 BCAS4Q8TDM0 211 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 PIK3R3Q92569 461 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 SARAFQ96BY9 339 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 ARHGDIGQ99819 225 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 TREX2Q9BQ50 279 aaPredicted RBP6.85□□□□□ -1.31
USP16-204ENST00000399976 PLA2G3Q9NZ20 509 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 KLRF1Q9NZS2 232 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 CD300AQ9UGN4 299 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 ZNF232Q9UNY5 417 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 NCOA6Q14686 2063 aaPredicted RBP6.85□□□□□ -1.31
USP16-204ENST00000399976 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 MYOCOSA0A1B0GUC4 107 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 A0A1B0GUH1 482 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 GJE1A6NN92 205 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 AHRRA9YTQ3 701 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 MASP2O00187 686 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 ZNF208O43345 1280 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 PGM3O95394 542 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 PEPDP12955 493 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 PGCP20142 388 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 NME5P56597 212 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 B3GALT5-AS1P59052 145 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 MERTKQ12866 999 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 SCARB2Q14108 478 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 SLC10A1Q14973 349 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 DNAL1Q4LDG9 190 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 COX20Q5RI15 118 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.85□□□□□ -1.31
USP16-204ENST00000399976 AAGABQ6PD74 315 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 CHERPQ8IWX8 916 aaKnown RBP6.85□□□□□ -1.31
USP16-204ENST00000399976 WDFY3Q8IZQ1 3526 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 TMEM251Q8N6I4 163 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 OR4N2Q8NGD1 307 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 OR5AK3PQ8NH89 298 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 SNRNP40Q96DI7 357 aaKnown RBP6.85□□□□□ -1.31
USP16-204ENST00000399976 TMEM19Q96HH6 336 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 ZNF583Q96ND8 569 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 PIGQQ9BRB3 760 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 RNF122Q9H9V4 155 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.85□□□□□ -1.31
USP16-204ENST00000399976 ZNF443Q9Y2A4 671 aaPredicted RBP6.85□□□□□ -1.31
USP16-204ENST00000399976 ZNF175Q9Y473 711 aa6.85□□□□□ -1.31
USP16-204ENST00000399976 SPIN1Q9Y657 262 aaPredicted RBP6.85□□□□□ -1.31
USP16-204ENST00000399976 NDUFB5O43674 189 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 CRHP06850 196 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 LINGO3P0C6S8 592 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 NR2F1P10589 423 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 ETFAP13804 333 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 CPOXP36551 454 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 APOBEC1P41238 236 aaKnown RBP6.84□□□□□ -1.31
USP16-204ENST00000399976 CRATP43155 626 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 RASSF2P50749 326 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 PRKAG1P54619 331 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 KCNJ10P78508 379 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 EPS8Q12929 822 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 TRAP1Q12931 704 aaKnown RBP6.84□□□□□ -1.31
USP16-204ENST00000399976 NRF1Q16656 503 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 VASNQ6EMK4 673 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 FAM180BQ6P0A1 224 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 ANGPTL8Q6UXH0 198 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.84□□□□□ -1.31
USP16-204ENST00000399976 SLC15A3Q8IY34 581 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 MICU2Q8IYU8 434 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 FITM2Q8N6M3 262 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 FAM57AQ8TBR7 257 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 RCN3Q96D15 328 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 ANKRD19PQ9H560 264 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 RUBCNLQ9H714 662 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 CALHM2Q9HA72 323 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 EQTNQ9NQ60 294 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 WDR70Q9NW82 654 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 DNAJB12Q9NXW2 375 aaKnown RBP6.84□□□□□ -1.31
USP16-204ENST00000399976 MAGEL2Q9UJ55 1249 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 COL6A6A6NMZ7 2263 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 CD8B2A6NJW9 211 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 EIF4E1BA6NMX2 242 aaKnown RBP6.84□□□□□ -1.31
USP16-204ENST00000399976 MFN2O95140 757 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 HPGDP15428 266 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 PPIAP62937 165 aaKnown RBP6.84□□□□□ -1.31
USP16-204ENST00000399976 KCNJ2P63252 427 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 CRYZQ08257 329 aaKnown RBP6.84□□□□□ -1.31
USP16-204ENST00000399976 SELENBP1Q13228 472 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 ART3Q13508 389 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 PDK3Q15120 406 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 PLPPR5Q32ZL2 321 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 TMEM211Q6ICI0 200 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 ANKFN1Q8N957 763 aa6.84□□□□□ -1.31
USP16-204ENST00000399976 OR5D16Q8NGK9 328 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms