RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 BRD7Q9NPI1 651 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 CDH10Q9Y6N8 788 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 CCDC182A6NF36 153 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 SLITRK5O94991 958 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 CAPZBP47756 277 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 APOFQ13790 326 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 CTU2Q2VPK5 515 aaKnown RBP13.07□□□□□ -0.32
SCAF4-202ENST00000399804 IGFN1Q86VF2 1251 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 OR5L2Q8NGL0 311 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 RHOXF1Q8NHV9 184 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 RHBDD1Q8TEB9 315 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 ARSGQ96EG1 525 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 HDHD5Q9BXW7 423 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 RACGAP1Q9H0H5 632 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 MMP27Q9H306 513 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 FOLH1BQ9HBA9 442 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 TRAV27A0A087WT01 109 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 TRBV5-3A0A0A0MS03 114 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 TRIM3O75382 744 aaPredicted RBP13.07□□□□□ -0.32
SCAF4-202ENST00000399804 FUCA1P04066 466 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 HOXC4P09017 264 aaPredicted RBP13.07□□□□□ -0.32
SCAF4-202ENST00000399804 TACSTD2P09758 323 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 MYF5P13349 255 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 ZNF41P51814 821 aaPredicted RBP13.07□□□□□ -0.32
SCAF4-202ENST00000399804 ZNF91Q05481 1191 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 PUM1Q14671 1186 aaKnown RBP eCLIP13.07□□□□□ -0.323e-9■■■■□ 21.1
SCAF4-202ENST00000399804 ZSWIM7Q19AV6 140 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 VN1R4Q7Z5H5 301 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 S1PR5Q9H228 398 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 GAREM1Q9H706 876 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 UBQLN4Q9NRR5 601 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 SCN3AQ9NY46 2000 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 FAM240BA0A1B0GVZ2 78 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 A0A1W2PPV9 198 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 CLDN24A6NM45 220 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 NDUFB2O95178 105 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 IL9P15248 144 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 ENDOUP21128 410 aaKnown RBP13.07□□□□□ -0.32
SCAF4-202ENST00000399804 MMP11P24347 488 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 ALDH3B2P48448 385 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 BMXP51813 675 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 SCN1BQ07699 218 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 GAB4Q2WGN9 574 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 ARHGAP11AQ6P4F7 1023 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 ZCCHC12Q6PEW1 402 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 ULK3Q6PHR2 472 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 KLHL24Q6TFL4 600 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 FNDC8Q8TC99 324 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 OR2A5Q96R48 311 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 OR51E2Q9H255 320 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 PTGES2Q9H7Z7 377 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 POMT2Q9UKY4 750 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 CARD8Q9Y2G2 431 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 LMO7DNF2Z398 122 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 ZNF701M0R085 212 aaPredicted RBP13.07□□□□□ -0.32
SCAF4-202ENST00000399804 SNPHO15079 494 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 TLX3O43711 291 aaPredicted RBP13.07□□□□□ -0.32
SCAF4-202ENST00000399804 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.07□□□□□ -0.32
SCAF4-202ENST00000399804 YIPF7Q8N8F6 280 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 GPBAR1Q8TDU6 330 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 COMMD4Q9H0A8 199 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 DUSP22Q9NRW4 184 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 STMN3Q9NZ72 180 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 ENPP5Q9UJA9 477 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 PCDHGA6Q9Y5G7 932 aa13.07□□□□□ -0.32
SCAF4-202ENST00000399804 IGHV1OR15-9A0A0B4J2B8 117 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 C12orf71A8MTZ7 269 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 NPIPA5E9PKD4 350 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 NPIPB8E9PQR5 432 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 PEX12O00623 359 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 P2RX6O15547 441 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 MRPS14O60783 128 aaKnown RBP13.06□□□□□ -0.32
SCAF4-202ENST00000399804 UBL4AP11441 157 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 ATP12AP54707 1039 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 CTXN1P60606 82 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 BTG2P78543 158 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 HNRNPA0Q13151 305 aaKnown RBP13.06□□□□□ -0.32
SCAF4-202ENST00000399804 ANGPT1Q15389 498 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 ODF4Q2M2E3 257 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 PGBD2Q6P3X8 592 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 PLET1Q6UQ28 207 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 Q7L0L9 218 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 BCDIN3DQ7Z5W3 292 aaKnown RBP13.06□□□□□ -0.32
SCAF4-202ENST00000399804 PPP1R3BQ86XI6 285 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 SGCDQ92629 289 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 RPL3LQ92901 407 aaKnown RBP13.06□□□□□ -0.32
SCAF4-202ENST00000399804 TMCO6Q96DC7 493 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 PRRG4Q9BZD6 226 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 SEC61A2Q9H9S3 476 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 TCF7L1Q9HCS4 588 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 SLC52A3Q9NQ40 469 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 ATXN7L1Q9ULK2 861 aaPredicted RBP13.06□□□□□ -0.32
SCAF4-202ENST00000399804 NPIPA1Q9UND3 350 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 PCDHGA10Q9Y5H3 936 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 SOX3P41225 446 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 PPP1CAP62136 330 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 QPRTQ15274 297 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 PRSS41Q7RTY9 318 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 OR6N2Q8NGY6 317 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 NDNFQ8TB73 568 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms