RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 MISPQ8IVT2 679 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 RIMKLAQ8IXN7 391 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 GATSQ8NAP1 163 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 SFXN5Q8TD22 340 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 SMPDL3BQ92485 455 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 CDS1Q92903 461 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 MOAP1Q96BY2 351 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 PPP1R36Q96LQ0 422 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 DUSP26Q9BV47 211 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 PINK1Q9BXM7 581 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 ACTRT3Q9BYD9 372 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 CLEC4MQ9H2X3 399 aaPredicted RBP12.09□□□□□ -0.47
VCX3A-202ENST00000398729 PIGUQ9H490 435 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 CXorf36Q9H7Y0 433 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 ZNF395Q9H8N7 513 aaPredicted RBP12.09□□□□□ -0.47
VCX3A-202ENST00000398729 KCNK9Q9NPC2 374 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 FBXO34Q9NWN3 711 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 ASIC5Q9NY37 505 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 PACSIN3Q9UKS6 424 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 VDAC3Q9Y277 283 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 RAP2CQ9Y3L5 183 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 ACTL7BQ9Y614 415 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 FN1P02751 2386 aaKnown RBP12.09□□□□□ -0.47
VCX3A-202ENST00000398729 COL6A5A8TX70 2615 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 MPDZO75970 2070 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 A0A1W2PNV4 684 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 A0A1W2PQD3 144 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 H0YC42 278 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 TNFSF13O75888 250 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 RPL14P50914 215 aaKnown RBP12.08□□□□□ -0.48
VCX3A-202ENST00000398729 ZNF41P51814 821 aaPredicted RBP12.08□□□□□ -0.48
VCX3A-202ENST00000398729 TPD52P55327 224 aaPredicted RBP12.08□□□□□ -0.48
VCX3A-202ENST00000398729 CLDN15P56746 228 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 CLDN20P56880 219 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 C21orf58P58505 322 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 OCRLQ01968 901 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 FOXD4Q12950 439 aaPredicted RBP12.08□□□□□ -0.48
VCX3A-202ENST00000398729 DAZAP2Q15038 168 aaPredicted RBP12.08□□□□□ -0.48
VCX3A-202ENST00000398729 SGCBQ16585 318 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 TMEM44Q2T9K0 475 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 PGS1Q32NB8 556 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 TNFAIP8L3Q5GJ75 292 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 FBXW10Q5XX13 1052 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 BHLHB9Q6PI77 547 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 CAMKMTQ7Z624 323 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 CNEP1R1Q8N9A8 125 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 LINC01560Q8TB33 94 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 ACTRT2Q8TDY3 377 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 ADAMTS15Q8TE58 950 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 NUDT8Q8WV74 236 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 NINJ1Q92982 152 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 ZBTB8AQ96BR9 441 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 PGM2Q96G03 612 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 AKTIPQ9H8T0 292 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 GALNT8Q9NY28 637 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 ZNF175Q9Y473 711 aa12.08□□□□□ -0.48
VCX3A-202ENST00000398729 A8MXE2 369 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 MSTNO14793 375 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 SMNDC1O75940 238 aaKnown RBP eCLIP12.07□□□□□ -0.48
VCX3A-202ENST00000398729 BGNP21810 368 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 SOAT1P35610 550 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 HBA1P69905 142 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 STX3Q13277 289 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 PON3Q15166 354 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 DCST2Q5T1A1 773 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 METTL25Q8N6Q8 603 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 ZNF527Q8NB42 609 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 CHDHQ8NE62 594 aaPredicted RBP12.07□□□□□ -0.48
VCX3A-202ENST00000398729 B4GALNT2Q8NHY0 566 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 FNDC9Q8TBE3 224 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 FIG4Q92562 907 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 SH3YL1Q96HL8 342 aaPredicted RBP12.07□□□□□ -0.48
VCX3A-202ENST00000398729 ZNF845Q96IR2 970 aaPredicted RBP12.07□□□□□ -0.48
VCX3A-202ENST00000398729 SORT1Q99523 831 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 PAIP2Q9BPZ3 127 aaKnown RBP12.07□□□□□ -0.48
VCX3A-202ENST00000398729 C20orf27Q9GZN8 174 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 HOXD1Q9GZZ0 328 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 MED17Q9NVC6 651 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 GPATCH2Q9NW75 528 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 PCDHGB4Q9UN71 923 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 EDARQ9UNE0 448 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 TLN2Q9Y4G6 2542 aa12.07□□□□□ -0.48
VCX3A-202ENST00000398729 C7orf72A4D263 438 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 SHISA8B8ZZ34 492 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 H3BNH8 94 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 GOSR1O95249 250 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 FCGR2AP12318 317 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 CPOXP36551 454 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 EIF1AXP47813 144 aaKnown RBP12.06□□□□□ -0.48
VCX3A-202ENST00000398729 MPP2Q14168 576 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 FGFBP1Q14512 234 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 CD226Q15762 336 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 PLPPR5Q32ZL2 321 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 OR4F3Q6IEY1 312 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 MTERF4Q7Z6M4 381 aaKnown RBP12.06□□□□□ -0.48
VCX3A-202ENST00000398729 GGNQ86UU5 652 aa12.06□□□□□ -0.48
VCX3A-202ENST00000398729 WDR75Q8IWA0 830 aaKnown RBP12.06□□□□□ -0.48
VCX3A-202ENST00000398729 GTPBP8Q8N3Z3 284 aaPredicted RBP12.06□□□□□ -0.48
VCX3A-202ENST00000398729 OR5AK3PQ8NH89 298 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms