RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 A0A1W2PP18 115 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 CD8B2A6NJW9 211 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 B4DXG7 233 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 CLDN14O95500 239 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 CLDN1O95832 211 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 GLI4P10075 376 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 ZNF708P17019 499 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 HK1P19367 917 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 NCF2P19878 526 aaPredicted RBP12.94□□□□□ -0.34
HDDC2-202ENST00000398153 PPIBP23284 216 aaKnown RBP12.94□□□□□ -0.34
HDDC2-202ENST00000398153 CHRNB4P30926 498 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 TIMP3P35625 211 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 MDH1P40925 334 aaKnown RBP12.94□□□□□ -0.34
HDDC2-202ENST00000398153 EIF1P41567 113 aaKnown RBP12.94□□□□□ -0.34
HDDC2-202ENST00000398153 LHX2P50458 406 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 P2RX1P51575 399 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 ZNF41P51814 821 aaPredicted RBP12.94□□□□□ -0.34
HDDC2-202ENST00000398153 HPCAP84074 193 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 GUCY1A3Q02108 690 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 PMPCAQ10713 525 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 GNA13Q14344 377 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 C6orf10Q5SRN2 563 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 LRIF1Q5T3J3 769 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 RIPPLY2Q5TAB7 128 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 NSUN5P2Q63ZY6 315 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 TNFAIP8L2Q6P589 184 aaPredicted RBP12.94□□□□□ -0.34
HDDC2-202ENST00000398153 MARVELD2Q8N4S9 558 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 B4GALNT2Q8NHY0 566 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 PHOSPHO1Q8TCT1 267 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 CA5BP1Q8WTZ4 195 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 VPS33AQ96AX1 596 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 ALKBH4Q9NXW9 302 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 CALML5Q9NZT1 146 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 TNFRSF10DQ9UBN6 386 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 CAMK2AQ9UQM7 478 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 WDR45Q9Y484 360 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 AP4B1Q9Y6B7 739 aa12.94□□□□□ -0.34
HDDC2-202ENST00000398153 SPTBN1Q01082 2364 aaKnown RBP12.93□□□□□ -0.34
HDDC2-202ENST00000398153 SPTAN1Q13813 2472 aaKnown RBP12.93□□□□□ -0.34
HDDC2-202ENST00000398153 SERINC4A6NH21 518 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 HSPB2A8KAH6 182 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 GTPBP1O00178 669 aaKnown RBP12.93□□□□□ -0.34
HDDC2-202ENST00000398153 ZNF264O43296 627 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 HCRTR2O43614 444 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 KIAA0513O60268 411 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 FCMRO60667 390 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 UGT2B17O75795 530 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 GSNP06396 782 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 VIMP08670 466 aaKnown RBP12.93□□□□□ -0.34
HDDC2-202ENST00000398153 ADH6P28332 368 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 NUP107P57740 925 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 B3GALT5-AS1P59052 145 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 FADDQ13158 208 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 GPR68Q15743 365 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 CD226Q15762 336 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 HSPB2Q16082 182 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 TMEM44Q2T9K0 475 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 ACSF3Q4G176 576 aaPredicted RBP12.93□□□□□ -0.34
HDDC2-202ENST00000398153 AGKQ53H12 422 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 RAET1LQ5VY80 246 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 TYW3Q6IPR3 259 aaKnown RBP12.93□□□□□ -0.34
HDDC2-202ENST00000398153 LRRC74BQ6ZQY2 392 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 ZNF619Q8N2I2 560 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 GTPBP8Q8N3Z3 284 aaPredicted RBP12.93□□□□□ -0.34
HDDC2-202ENST00000398153 LILRB4Q8NHJ6 448 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 RFWD2Q8NHY2 731 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 RAB8BQ92930 207 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 PAIP1Q9H074 479 aaKnown RBP12.93□□□□□ -0.34
HDDC2-202ENST00000398153 ZNF385DQ9H6B1 395 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 MTHFD2LQ9H903 347 aaPredicted RBP12.93□□□□□ -0.34
HDDC2-202ENST00000398153 SLC52A3Q9NQ40 469 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 FGFR1OP2Q9NVK5 253 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 ICAM5Q9UMF0 924 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 CORO2BQ9UQ03 480 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 SLC35A3Q9Y2D2 325 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 PCDHB14Q9Y5E9 798 aa12.93□□□□□ -0.34
HDDC2-202ENST00000398153 ARHGAP21Q5T5U3 1957 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 OR2M5A3KFT3 312 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 TMEM247A6NEH6 219 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 CLIC1O00299 241 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 IL2RAP01589 272 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 UBL4AP11441 157 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 ADSLP30566 484 aaPredicted RBP12.92□□□□□ -0.34
HDDC2-202ENST00000398153 ARFIP2P53365 341 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 MVDP53602 400 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 CLDN18P56856 261 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 EEF1A1P68104 462 aaKnown RBP12.92□□□□□ -0.34
HDDC2-202ENST00000398153 ZSWIM7Q19AV6 140 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 GPAT3Q53EU6 434 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.92□□□□□ -0.34
HDDC2-202ENST00000398153 PDZK1Q5T2W1 519 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 EEF1A1P5Q5VTE0 462 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 FRRS1Q6ZNA5 592 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 EIF3MQ7L2H7 374 aaKnown RBP12.92□□□□□ -0.34
HDDC2-202ENST00000398153 ADGRE4PQ86SQ3 457 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 CMIPQ8IY22 773 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 MEIOBQ8N635 442 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 OR10Q1Q8NGQ4 319 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 SDCCAG3Q96C92 435 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 ARSGQ96EG1 525 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms