RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CRTC3Q6UUV7 619 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ZBTB2Q8N680 514 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 OR2L2Q8NH16 312 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 HMGCLL1Q8TB92 370 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 HGDQ93099 445 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF347Q96SE7 839 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 COL25A1Q9BXS0 654 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF768Q9H5H4 540 aaKnown RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 GPN2Q9H9Y4 310 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 YAE1D1Q9NRH1 226 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 SCN5AQ14524 2016 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 DMXL1Q9Y485 3027 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 A0A0U1RQS6 177 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 MEIOCA2RUB1 952 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 J3QRK9 145 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 SSX4O60224 188 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 TULP3O75386 442 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 NDST3O95803 873 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 SNAI1O95863 264 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 PTTG1O95997 202 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 MT-ND5P03915 603 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 SLC35E2P0CK97 266 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 AREGP15514 252 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 HPCAL1P37235 193 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ARRB1P49407 418 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 STK19P49842 368 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 HLCSP50747 726 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 PRKXP51817 358 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 SLAMF1Q13291 335 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 CAMK2GQ13555 558 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ENPP2Q13822 863 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 PTPRCAPQ14761 206 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 RAB39AQ14964 217 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 P2RY14Q15391 338 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 GCNT7Q6ZNI0 430 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 RPS27LQ71UM5 84 aaKnown RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 GPRIN1Q7Z2K8 1008 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 RTN4RL2Q86UN3 420 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 FBXO39Q8N4B4 442 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 STAG3L4Q8TBR4 150 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 RAB2BQ8WUD1 216 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 MYLPFQ96A32 169 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 FBXL8Q96CD0 374 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 PABPC5Q96DU9 382 aaKnown RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 SLC25A18Q9H1K4 315 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 MBNL1Q9NR56 388 aaKnown RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 SDR39U1Q9NRG7 319 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ELF5Q9UKW6 265 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 SSR3Q9UNL2 185 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 SLC27A6Q9Y2P4 619 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 TIMM13Q9Y5L4 95 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 CFAP54Q96N23 3096 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 A0A1W2PP18 115 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 FAM86C2PA6NEL3 165 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 CCDC182A6NF36 153 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 H3BMQ9 156 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 I6L893 689 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 UGT2B4P06133 528 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ANXA4P09525 319 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 SLC6A2P23975 617 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 DDOSTP39656 456 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 GATA4P43694 442 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 GSK3BP49841 420 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 TMBIM6P55061 237 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 RAB11AP62491 216 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 B4GALNT1Q00973 533 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 CHRNB3Q05901 458 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 GPR19Q15760 415 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 RAB11BQ15907 218 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 PGS1Q32NB8 556 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 C14orf28Q4W4Y0 310 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 PLEKHS1Q5SXH7 462 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 TTC23Q5W5X9 447 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ISCA2Q86U28 154 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 KMT5CQ86Y97 462 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 FUNDC1Q8IVP5 155 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 C1orf210Q8IVY1 113 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 C12orf45Q8N5I9 185 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 DNAJB14Q8TBM8 379 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ASB5Q8WWX0 329 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 PSMG2Q969U7 264 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ERGIC1Q969X5 290 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 C3orf49Q96BT1 292 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 FBXL20Q96IG2 436 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 LCORQ96JN0 433 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF599Q96NL3 588 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 TM6SF2Q9BZW4 377 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 RPF2Q9H7B2 306 aaKnown RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 KIR3DX1Q9H7L2 352 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 IL21RQ9HBE5 538 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 POPDC3Q9HBV1 291 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 MYNNQ9NPC7 610 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ACSS1Q9NUB1 689 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 CLEC4EQ9ULY5 219 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 DNAJC15Q9Y5T4 150 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF638Q14966 1978 aaKnown RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ELOVL7A1L3X0 281 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 ANKRD61A6NGH8 418 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 BCKDKO14874 412 aa6.16□□□□□ -1.42
TM9SF4-202ENST00000398022 CAPN5O15484 640 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms