RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 PGM1P36871 562 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 MGAT2Q10469 447 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 SELPLGQ14242 412 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 LASP1Q14847 261 aaKnown RBP12.47□□□□□ -0.41
SEC13-205ENST00000397101 ZNHIT3Q15649 155 aaPredicted RBP12.47□□□□□ -0.41
SEC13-205ENST00000397101 CYP51A1Q16850 503 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 RABL3Q5HYI8 236 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.47□□□□□ -0.41
SEC13-205ENST00000397101 IL20RBQ6UXL0 311 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 SLC29A4Q7RTT9 530 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 MSRB3Q8IXL7 192 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 ARHGAP24Q8N264 748 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 OR2L13Q8N349 312 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 FBXW8Q8N3Y1 598 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 RELL2Q8NC24 303 aaPredicted RBP12.47□□□□□ -0.41
SEC13-205ENST00000397101 OR8J3Q8NGG0 315 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 OR8K3Q8NH51 312 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 FBXO30Q8TB52 745 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 ADAMTS15Q8TE58 950 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 SLC9A6Q92581 669 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 NEURL3Q96EH8 262 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 FBXL20Q96IG2 436 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 MS4A4EQ96PG1 132 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 CPPED1Q9BRF8 314 aaPredicted RBP12.47□□□□□ -0.41
SEC13-205ENST00000397101 RYDENQ9NUL5 291 aaKnown RBP12.47□□□□□ -0.41
SEC13-205ENST00000397101 ZNF629Q9UEG4 869 aaPredicted RBP12.47□□□□□ -0.41
SEC13-205ENST00000397101 PRODH2Q9UF12 536 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 PACSIN3Q9UKS6 424 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 CFL2Q9Y281 166 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 AP3M1Q9Y2T2 418 aa12.47□□□□□ -0.41
SEC13-205ENST00000397101 TRGV5A0A0B4J1U4 118 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 A0A0G2JMM0 328 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 A0A1W2PPB8 328 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 A0A1W2PRS3 328 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 TMEM247A6NEH6 219 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 KIR3DP1A8MWS1 328 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 FXYD1O00168 92 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 GSTA4O15217 222 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 CBX7O95931 251 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 HMGN2P05204 90 aaKnown RBP12.46□□□□□ -0.41
SEC13-205ENST00000397101 ALOX5P09917 674 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 SLC6A2P23975 617 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 PTPN6P29350 595 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 CEACAM8P31997 349 aaPredicted RBP12.46□□□□□ -0.41
SEC13-205ENST00000397101 CPOXP36551 454 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 SOX3P41225 446 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 KHKP50053 298 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 RPS26P62854 115 aaKnown RBP12.46□□□□□ -0.41
SEC13-205ENST00000397101 SORDQ00796 357 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 FUT7Q11130 342 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 SNTB1Q13884 538 aaKnown RBP12.46□□□□□ -0.41
SEC13-205ENST00000397101 SAXO2Q658L1 398 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 TNFAIP8L2Q6P589 184 aaPredicted RBP12.46□□□□□ -0.41
SEC13-205ENST00000397101 HSDL2Q6YN16 418 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 Q71RC1 249 aaPredicted RBP12.46□□□□□ -0.41
SEC13-205ENST00000397101 RNF148Q8N7C7 305 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 OR10A6Q8NH74 314 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 CTHRC1Q96CG8 243 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 OTUB1Q96FW1 271 aaPredicted RBP12.46□□□□□ -0.41
SEC13-205ENST00000397101 C16orf58Q96GQ5 468 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 GAL3ST4Q96RP7 486 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 ACTRT3Q9BYD9 372 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 OR51I1Q9H343 314 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 LDAHQ9H6V9 325 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 SACM1LQ9NTJ5 587 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 CMTM6Q9NX76 183 aa12.46□□□□□ -0.41
SEC13-205ENST00000397101 PRPF19Q9UMS4 504 aaKnown RBP12.46□□□□□ -0.41
SEC13-205ENST00000397101 CSPG4Q6UVK1 2322 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 TRBV5-3A0A0A0MS03 114 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 GSC2O15499 205 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 NME6O75414 186 aaPredicted RBP12.45□□□□□ -0.42
SEC13-205ENST00000397101 GMNNO75496 209 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 STAMBPO95630 424 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 IFI6P09912 130 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 ETFAP13804 333 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 TCN1P20061 433 aaPredicted RBP12.45□□□□□ -0.42
SEC13-205ENST00000397101 ENDOUP21128 410 aaKnown RBP12.45□□□□□ -0.42
SEC13-205ENST00000397101 TIMP3P35625 211 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 DSTNP60981 165 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 DCAF7P61962 342 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 LIPEQ05469 1076 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 RGNQ15493 299 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 SAMD4BQ5PRF9 694 aaKnown RBP12.45□□□□□ -0.42
SEC13-205ENST00000397101 COX20Q5RI15 118 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 GCNT6Q5T4J0 391 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 ATAD3BQ5T9A4 648 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 SEM1Q6ZVN7 128 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 KIF18BQ86Y91 864 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 SLC44A2Q8IWA5 706 aaPredicted RBP12.45□□□□□ -0.42
SEC13-205ENST00000397101 SLC15A3Q8IY34 581 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 ULK2Q8IYT8 1036 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 ZNF321PQ8N8H1 164 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 CDRT4Q8N9R6 151 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 SIMC1Q8NDZ2 872 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 ZNF721Q8TF20 911 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 XAGE5Q8WWM1 108 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 COX4I2Q96KJ9 171 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 KCTD14Q9BQ13 255 aaPredicted RBP12.45□□□□□ -0.42
SEC13-205ENST00000397101 LRMDAQ9H2I8 198 aa12.45□□□□□ -0.42
SEC13-205ENST00000397101 FOLH1BQ9HBA9 442 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms