RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 WDR75Q8IWA0 830 aaKnown RBP12.6□□□□□ -0.39
SEC13-204ENST00000397099 GTPBP8Q8N3Z3 284 aaPredicted RBP12.6□□□□□ -0.39
SEC13-204ENST00000397099 NAXEQ8NCW5 288 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 FBXO30Q8TB52 745 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 MIPOL1Q8TD10 442 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 CDS1Q92903 461 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 ARL8AQ96BM9 186 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 PPP1R36Q96LQ0 422 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 YIPF4Q9BSR8 244 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 NMUR2Q9GZQ4 415 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 POLE3Q9NRF9 147 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 PNPOQ9NVS9 261 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 FLRT3Q9NZU0 649 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 CLCF1Q9UBD9 225 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 EDARQ9UNE0 448 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 ZNF337Q9Y3M9 751 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 PCNX3Q9H6A9 2034 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 AKAP9Q99996 3911 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 RNF103-CHMP3A0A140T963 221 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 SLC22A20A6NK97 555 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 SDHDO14521 159 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 ANKRD28O15084 1053 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 STX11O75558 287 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 MATN1P21941 496 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 UQCRC1P31930 480 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 S100A3P33764 101 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 MAGEA8P43361 318 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 KIR2DL3P43628 341 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 TMEM44Q2T9K0 475 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 FLYWCH1Q4VC44 716 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 KLHL26Q53HC5 615 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 PDSS1Q5T2R2 415 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 POMZP3Q6PJE2 187 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 APOOLQ6UXV4 268 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 GOLGA6L1Q8N7Z2 621 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 C9orf106Q8NAJ2 232 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 RELL2Q8NC24 303 aaPredicted RBP12.59□□□□□ -0.39
SEC13-204ENST00000397099 CHDHQ8NE62 594 aaPredicted RBP12.59□□□□□ -0.39
SEC13-204ENST00000397099 TOR1AIP2Q8NFQ8 470 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 OR4A15Q8NGL6 344 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 B4GALNT2Q8NHY0 566 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 PIWIL2Q8TC59 973 aaKnown RBP12.59□□□□□ -0.39
SEC13-204ENST00000397099 MGARPQ8TDB4 240 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 FAM222BQ8WU58 562 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 SLC35G5Q96KT7 338 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 OR7D2Q96RA2 312 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 SH3GL2Q99962 352 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 RTN4RQ9BZR6 473 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 JKAMPQ9P055 326 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 BTNL2Q9UIR0 455 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 L3MBTL1Q9Y468 752 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 DTNAQ9Y4J8 743 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 CELSR1Q9NYQ6 3014 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 POLQO75417 2590 aa12.59□□□□□ -0.39
SEC13-204ENST00000397099 GJE1A6NN92 205 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 B4DXG7 233 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 GTPBP1O00178 669 aaKnown RBP12.58□□□□□ -0.4
SEC13-204ENST00000397099 EIF4E2O60573 245 aaKnown RBP12.58□□□□□ -0.4
SEC13-204ENST00000397099 IL6P05231 212 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 ELK4P28324 431 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 STARP49675 285 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 P2RX1P51575 399 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 WNT3P56703 355 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 RAC1P63000 192 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 GSTA3Q16772 222 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 ARHGAP11BQ3KRB8 267 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 AP1ARQ63HQ0 302 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 ESPNLQ6ZVH7 1005 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 METTL25Q8N6Q8 603 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 PHOSPHO1Q8TCT1 267 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 PMM1Q92871 262 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 NEURL3Q96EH8 262 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 MAELQ96JY0 434 aaKnown RBP12.58□□□□□ -0.4
SEC13-204ENST00000397099 CCDC115Q96NT0 180 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 SDF2Q99470 211 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 TIGARQ9NQ88 270 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 AIG1Q9NVV5 245 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 PRDM4Q9UKN5 801 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 PACSIN3Q9UKS6 424 aa12.58□□□□□ -0.4
SEC13-204ENST00000397099 GPC6Q9Y625 555 aaPredicted RBP12.58□□□□□ -0.4
SEC13-204ENST00000397099 MAP1AP78559 2803 aaPredicted RBP12.58□□□□□ -0.4
SEC13-204ENST00000397099 EEF1E1-BLOC1S5C9J1V9 151 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 NPIPB9F8W1W9 429 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 H3BML4 177 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 MSTNO14793 375 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 EEF1E1O43324 174 aaKnown RBP12.57□□□□□ -0.4
SEC13-204ENST00000397099 SCN2BO60939 215 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 TGDSO95455 350 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 PGRP06401 933 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 KHKP50053 298 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 DLX5P56178 289 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 IRX1P78414 480 aaPredicted RBP12.57□□□□□ -0.4
SEC13-204ENST00000397099 SGCBQ16585 318 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 PLPPR5Q32ZL2 321 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 FAM174BQ3ZCQ3 159 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 SPANXN4Q5MJ08 99 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 CCNJQ5T5M9 372 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 GTF2IRD2BQ6EKJ0 949 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 MSANTD1Q6ZTZ1 278 aa12.57□□□□□ -0.4
SEC13-204ENST00000397099 HDXQ7Z353 690 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms