RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ELP4Q96EB1 424 aa16.1■□□□□ 0.17
TNFSF13-205ENST00000396545 OR1F2PQ96R84 312 aa16.1■□□□□ 0.17
TNFSF13-205ENST00000396545 PELOQ9BRX2 385 aaKnown RBP16.1■□□□□ 0.17
TNFSF13-205ENST00000396545 YIPF2Q9BWQ6 316 aa16.1■□□□□ 0.17
TNFSF13-205ENST00000396545 PLA2G3Q9NZ20 509 aa16.1■□□□□ 0.17
TNFSF13-205ENST00000396545 ENPP4Q9Y6X5 453 aa16.1■□□□□ 0.17
TNFSF13-205ENST00000396545 OTOGQ6ZRI0 2925 aa16.1■□□□□ 0.17
TNFSF13-205ENST00000396545 CPAMD8Q8IZJ3 1885 aa16.1■□□□□ 0.17
TNFSF13-205ENST00000396545 A0A087WV62 115 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 TMEM247A6NEH6 219 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 A8MVJ9 347 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 MITFO75030 526 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 DNAJB6O75190 326 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 UGT2B11O75310 529 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 SOX30O94993 753 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 HEXBP07686 556 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 CELA2AP08217 269 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 SLC35E2P0CK97 266 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 OR12D1P0DN82 309 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 RYKP34925 604 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 OR1E2P47887 323 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 HMGA2P52926 109 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 CDH15P55291 814 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 HSD17B7P56937 341 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 DUSP7Q16829 419 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 RBM48Q5RL73 367 aaKnown RBP16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 FAAH2Q6GMR7 532 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 TMEM205Q6UW68 189 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 LGI4Q8N135 537 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 SMYD1Q8NB12 490 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 GPR32P1Q8NGA4 272 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 ZNF675Q8TD23 568 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 NR4A3Q92570 626 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 PSD2Q9BQI7 771 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 ZNF700Q9H0M5 742 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 BCL2L10Q9HD36 194 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 DDX18Q9NVP1 670 aaKnown RBP16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 GPC6Q9Y625 555 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 SCN3AQ9NY46 2000 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 A0A1B0GUH1 482 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 TNFRSF11BO00300 401 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 C8orf89P0DMQ9 161 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 CDH2P19022 906 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 POLR2IP36954 125 aaKnown RBP16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 LIMS1P48059 325 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 HLCSP50747 726 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 ISL1P61371 349 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 IGLV3-21P80748 117 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 KEAP1Q14145 624 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 GNA13Q14344 377 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 PCOLCEQ15113 449 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 SYT16Q17RD7 645 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 TMEM107Q6UX40 140 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 OR5D16Q8NGK9 328 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 OR51Q1Q8NH59 317 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 BBS10Q8TAM1 723 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 RASSF5Q8WWW0 418 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 HDAC2Q92769 488 aaKnown RBP16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 ZNF607Q96SK3 696 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 PIP5K1AQ99755 562 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 RSPO3Q9BXY4 272 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 RNF32Q9H0A6 362 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 EXD2Q9NVH0 621 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 TESMINQ9Y4I5 508 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 MMACHCQ9Y4U1 282 aa16.09■□□□□ 0.17
TNFSF13-205ENST00000396545 FBN2P35556 2912 aa16.08■□□□□ 0.17
TNFSF13-205ENST00000396545 BCKDKO14874 412 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 ASNA1O43681 348 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 PLOD3O60568 738 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 OR6B1O95007 311 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 AGR2O95994 175 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 HMGN2P05204 90 aaKnown RBP16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 RHCEP18577 417 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 ELK4P28324 431 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 GALNSP34059 522 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 KCNJ5P48544 419 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 MAT1AQ00266 395 aaKnown RBP16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 FUT5Q11128 374 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 SERTAD2Q14140 314 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 SYPL1Q16563 259 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 CNPY1Q3B7I2 92 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 PRAMEF8Q5VWM4 474 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 PRAMEF7Q5VXH5 474 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 GALNT5Q7Z7M9 940 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 FJX1Q86VR8 437 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 CHDHQ8NE62 594 aaPredicted RBP16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 OR9A2Q8NGT5 310 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 GIPC3Q8TF64 312 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 RELTQ969Z4 430 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 ANKRD9Q96BM1 317 aaPredicted RBP16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 DGCR14Q96DF8 476 aaKnown RBP16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 IMMP1LQ96LU5 166 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 PITX2Q99697 317 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 TREX2Q9BQ50 279 aaPredicted RBP16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 GABARAPL3Q9BY60 117 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 YIPF3Q9GZM5 350 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 PRTFDC1Q9NRG1 225 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 HCN3Q9P1Z3 774 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 MKL2Q9ULH7 1088 aa16.08■□□□□ 0.16
TNFSF13-205ENST00000396545 HSPE1-MOB4S4R3N1 261 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms