RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MELKQ14680 651 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ARHGAP11BQ3KRB8 267 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF704Q6ZNC4 412 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ANKK1Q8NFD2 765 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 FANK1Q8TC84 345 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 LOXL4Q96JB6 756 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 METTL7AQ9H8H3 244 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 GIMAP2Q9UG22 337 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF225Q9UK10 706 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 VPS13AQ96RL7 3174 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 C17orf105B2RV13 164 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 K7ESM1 405 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 DLGAP3O95886 979 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PPICP45877 212 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF628Q5EBL2 1059 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 C6orf132Q5T0Z8 1188 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ABHD17BQ5VST6 288 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM225Q6GV28 225 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 EID2Q8N6I1 236 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 NAA11Q9BSU3 229 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 DUSP15Q9H1R2 295 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TPK1Q9H3S4 243 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 DUSP21Q9H596 190 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PNO1Q9NRX1 252 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RNF6Q9Y252 685 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 A0A1W2PQ72 361 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MBTPS2O43462 519 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 OPN1SWP03999 348 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 RAB14P61106 215 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 OC90Q02509 493 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SYT6Q5T7P8 510 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 QSOX2Q6ZRP7 698 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 VRK3Q8IV63 474 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM151BQ8IW70 566 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ST8SIA1Q92185 356 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MAL2Q969L2 176 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SGTBQ96EQ0 304 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TVP23BQ9NYZ1 205 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 FEZF1A0PJY2 475 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 NPIPA5E9PKD4 350 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 PEX14O75381 377 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 GUSBP08236 651 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TFPTP0C1Z6 253 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ITGB8P26012 769 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CLDN2P57739 230 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 PIN1Q13526 163 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 GINS1Q14691 196 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 NR0B2Q15466 257 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF691Q5VV52 312 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SAXO2Q658L1 398 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ANKRD26P1Q6NSI1 321 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 UGT2A3Q6UWM9 527 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CD300LDQ6UXZ3 194 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ABHD12BQ7Z5M8 362 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TPRA1Q86W33 373 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 KCT2Q8NC54 265 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 OR4D9Q8NGE8 314 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 OR8K3Q8NH51 312 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 NEIL3Q8TAT5 605 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ASB17Q8WXJ9 295 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 BPIFA2Q96DR5 249 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 GABARAPL1Q9H0R8 117 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TBC1D17Q9HA65 648 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 NPIPA1Q9UND3 350 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 B3GNT3Q9Y2A9 372 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 GATBO75879 557 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MT-ND2P03891 347 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 EFNA1P20827 205 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 PNLIPRP2P54317 469 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CSNK2A1P68400 391 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SIGLEC14Q08ET2 396 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MLLT11Q13015 90 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SPRED3Q2MJR0 410 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TCTN3Q6NUS6 607 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SPRED1Q7Z699 444 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 OR8H2Q8N162 312 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 OR13H1Q8NG92 308 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 FAR1Q8WVX9 515 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TM4SF18Q96CE8 201 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 DDIT4LQ96D03 193 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 S100A16Q96FQ6 103 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 FER1L6-AS2Q96M78 137 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 HHIPQ96QV1 700 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SEMA4CQ9C0C4 833 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 DDX28Q9NUL7 540 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 HCN2Q9UL51 889 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 K7EQS6 105 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SCRG1O75711 98 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 RAF1P04049 648 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 OR2T7P0C7T2 308 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 AHCYP23526 432 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 RBMS1P29558 406 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 OR1E2P47887 323 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 PCBP3P57721 371 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 RPS3AP61247 264 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 GRINAQ7Z429 371 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM17Q86X19 198 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 DEFB123Q8N688 67 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM102Q8N9M5 508 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 OR2T27Q8NH04 317 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms