RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ADSLP30566 484 aaPredicted RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 CCT3P49368 545 aaKnown RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 CLDN8P56748 225 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 ABCE1P61221 599 aaKnown RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 RPS26P62854 115 aaKnown RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 SORDQ00796 357 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 PLAURQ03405 335 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 ZNF117Q03924 483 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 EMX2Q04743 252 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 C17orf67Q0P5P2 114 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 KEAP1Q14145 624 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 SF3B4Q15427 424 aaKnown RBP eCLIP7.95□□□□□ -1.142e-6■■■■■ 28.8
ATG4A-205ENST00000394892 PDCD2Q16342 344 aaPredicted RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 PLPPR5Q32ZL2 321 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 ATP6AP1LQ52LC2 224 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 KLHL26Q53HC5 615 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 CPTPQ5TA50 214 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 OR4F3Q6IEY1 312 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 CDC73Q6P1J9 531 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 LRIG3Q6UXM1 1119 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 SZRD1Q7Z422 152 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 R3HCC1LQ7Z5L2 792 aaKnown RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 GRAMD2AQ8IUY3 354 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 GTPBP8Q8N3Z3 284 aaPredicted RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 COX18Q8N8Q8 333 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 FNDC5Q8NAU1 212 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 OR5D16Q8NGK9 328 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 OR5AK3PQ8NH89 298 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 ZFP28Q8NHY6 868 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 TUBGCP3Q96CW5 907 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 MBD6Q96DN6 1003 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 SH3YL1Q96HL8 342 aaPredicted RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 MARK4Q96L34 752 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 TEX37Q96LM6 180 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 ZFP3Q96NJ6 502 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 BTBD2Q9BX70 525 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 PINK1Q9BXM7 581 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 TBL1XR1Q9BZK7 514 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 PIGUQ9H490 435 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 GSX1Q9H4S2 264 aaPredicted RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 RNF122Q9H9V4 155 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 DUSP22Q9NRW4 184 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 ZCCHC3Q9NUD5 404 aaKnown RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 ASIC5Q9NY37 505 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 PACSIN3Q9UKS6 424 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 PRRC2AP48634 2157 aaKnown RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 A0A1W2PQD3 144 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 C7orf72A4D263 438 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 DEFB108AA8MXU0 73 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 TMEM114B3SHH9 223 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 C9JVG2 144 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 MSTNO14793 375 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 ADAMDEC1O15204 470 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 BIRC5O15392 142 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 RGS16O15492 202 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-205ENST00000394892 NDUFB5O43674 189 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 FCMRO60667 390 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 NTN1O95631 604 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 RAF1P04049 648 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 ALDOCP09972 364 aaKnown RBP7.94□□□□□ -1.14
ATG4A-205ENST00000394892 IL12AP29459 219 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 HPCAL1P37235 193 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 CASP9P55211 416 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 SIRPAP78324 504 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 ADAM8P78325 824 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 POU6F2P78424 691 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-205ENST00000394892 LTBQ06643 244 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 FUT5Q11128 374 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 GANABQ14697 944 aaKnown RBP7.94□□□□□ -1.14
ATG4A-205ENST00000394892 PON3Q15166 354 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 POU4F3Q15319 338 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 MAPK14Q16539 360 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 VPS26BQ4G0F5 336 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 ZCCHC12Q6PEW1 402 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 KRTAP1-3Q8IUG1 177 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 ZNF610Q8N9Z0 462 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 OR10D3Q8NH80 312 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 SMPDL3BQ92485 455 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 RNF145Q96MT1 663 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 WFIKKN1Q96NZ8 548 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 STACQ99469 402 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 PIGQQ9BRB3 760 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 DUSP26Q9BV47 211 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 ACTRT3Q9BYD9 372 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 BHLHE41Q9C0J9 482 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-205ENST00000394892 TMEM185BQ9H7F4 350 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 C3orf14Q9HBI5 128 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 SSU72Q9NP77 194 aaKnown RBP7.94□□□□□ -1.14
ATG4A-205ENST00000394892 SDHAF3Q9NRP4 125 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 UBQLN4Q9NRR5 601 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 FOXD3Q9UJU5 478 aaPredicted RBP7.94□□□□□ -1.14
ATG4A-205ENST00000394892 ICAM5Q9UMF0 924 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 CLEC4AQ9UMR7 237 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 RAP2CQ9Y3L5 183 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 ZNF175Q9Y473 711 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 TESMINQ9Y4I5 508 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 SNX8Q9Y5X2 465 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 AP4B1Q9Y6B7 739 aa7.94□□□□□ -1.14
ATG4A-205ENST00000394892 ABCA4P78363 2273 aa7.93□□□□□ -1.14
ATG4A-205ENST00000394892 SDHDO14521 159 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms