RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 CCL26Q9Y258 94 aa15.29■□□□□ 0.04
PHTF1-205ENST00000393357 ALPK3Q96L96 1907 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 ANXA2P2A6NMY6 339 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 SLC9A3R1O14745 358 aaPredicted RBP15.28■□□□□ 0.04
PHTF1-205ENST00000393357 PSMA3P25788 255 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 CTGFP29279 349 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 SMIM11AP58511 58 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 CDK5Q00535 292 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 LGALS3BPQ08380 585 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 HTR4Q13639 388 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 AGERQ15109 404 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 RPE65Q16518 533 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 LHFPL5Q8TAF8 219 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 TM4SF18Q96CE8 201 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 FCRL1Q96LA6 429 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 ADAT1Q9BUB4 502 aaKnown RBP15.28■□□□□ 0.04
PHTF1-205ENST00000393357 IFT27Q9BW83 186 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 ZCCHC2Q9C0B9 1178 aaKnown RBP15.28■□□□□ 0.04
PHTF1-205ENST00000393357 BTBD1Q9H0C5 482 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 KCNN2Q9H2S1 579 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 USP36Q9P275 1121 aaKnown RBP15.28■□□□□ 0.04
PHTF1-205ENST00000393357 IFNA16P05015 189 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 LIPCP11150 499 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 ATF1P18846 271 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 ERVK-25P63136 954 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 LTB4RQ15722 352 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 GXYLT1Q4G148 440 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 PRAMEF14Q5SWL7 426 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 PRAMEF13Q5VWM6 474 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 GDPD4Q6W3E5 623 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 OAFQ86UD1 273 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 SLC9B2Q86UD5 537 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 PIGXQ8TBF5 258 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 GRHL3Q8TE85 626 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 GHSRQ92847 366 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 SYT17Q9BSW7 474 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 ZNF768Q9H5H4 540 aaKnown RBP15.28■□□□□ 0.04
PHTF1-205ENST00000393357 C6orf106Q9H6K1 298 aaPredicted RBP15.28■□□□□ 0.04
PHTF1-205ENST00000393357 BABAM2Q9NXR7 383 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 OR10H1Q9Y4A9 318 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 TRAV27A0A087WT01 109 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 ACOD1A6NK06 481 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 NPIPB8E9PQR5 432 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 CLLU1Q5K131 121 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 CDKL4Q5MAI5 379 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 HBMQ6B0K9 141 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 ASTLQ6HA08 431 aaPredicted RBP15.28■□□□□ 0.04
PHTF1-205ENST00000393357 OR5J2Q8NH18 312 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 LGALS14Q8TCE9 139 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 CNOT9Q92600 299 aaKnown RBP15.28■□□□□ 0.04
PHTF1-205ENST00000393357 RFKQ969G6 155 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 YIPF5Q969M3 257 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 MCHR1Q99705 422 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 GLIPR2Q9H4G4 154 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 NT5DC2Q9H857 520 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 EMC7Q9NPA0 242 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 MYNNQ9NPC7 610 aa15.28■□□□□ 0.04
PHTF1-205ENST00000393357 PCDHGA9Q9Y5G4 932 aaKnown RBP15.28■□□□□ 0.04
PHTF1-205ENST00000393357 PRICKLE3O43900 615 aaPredicted RBP15.27■□□□□ 0.04
PHTF1-205ENST00000393357 SOCS5O75159 536 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 SLCO2B1O94956 709 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 FGF9P31371 208 aaPredicted RBP15.27■□□□□ 0.04
PHTF1-205ENST00000393357 SOX2P48431 317 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 SP140Q13342 867 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 ANKRD53Q8N9V6 530 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 MORN4Q8NDC4 146 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 OR8S1Q8NH09 359 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 OR56A3Q8NH54 315 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 APOBEC4Q8WW27 367 aaKnown RBP15.27■□□□□ 0.04
PHTF1-205ENST00000393357 ZMYND19Q96E35 227 aaPredicted RBP15.27■□□□□ 0.04
PHTF1-205ENST00000393357 NEURL3Q96EH8 262 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 OR14A2Q96R54 314 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 SOSTQ9BQB4 213 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 WDR26Q9H7D7 661 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 IFT46Q9NQC8 304 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 RPS6KB2Q9UBS0 482 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 SLC7A7Q9UM01 511 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 ATG2BQ96BY7 2078 aa15.27■□□□□ 0.04
PHTF1-205ENST00000393357 LOC100509620A0A075B734 347 aa15.27■□□□□ 0.03
PHTF1-205ENST00000393357 A0A087WV48 116 aa15.27■□□□□ 0.03
PHTF1-205ENST00000393357 SLC22A23A1A5C7 686 aa15.27■□□□□ 0.03
PHTF1-205ENST00000393357 SEC14L5O43304 696 aa15.27■□□□□ 0.03
PHTF1-205ENST00000393357 RPP14O95059 124 aaKnown RBP15.27■□□□□ 0.03
PHTF1-205ENST00000393357 IGF2P01344 180 aa15.27■□□□□ 0.03
PHTF1-205ENST00000393357 RAB3BP20337 219 aa15.27■□□□□ 0.03
PHTF1-205ENST00000393357 GBX2P52951 348 aaPredicted RBP15.27■□□□□ 0.03
PHTF1-205ENST00000393357 NDUFAF7Q7L592 441 aa15.27■□□□□ 0.03
PHTF1-205ENST00000393357 MED18Q9BUE0 208 aa15.27■□□□□ 0.03
PHTF1-205ENST00000393357 EFCAB11Q9BUY7 163 aa15.27■□□□□ 0.03
PHTF1-205ENST00000393357 PFDN2Q9UHV9 154 aa15.27■□□□□ 0.03
PHTF1-205ENST00000393357 NUBP2Q9Y5Y2 271 aa15.27■□□□□ 0.03
PHTF1-205ENST00000393357 NPC1O15118 1278 aa15.26■□□□□ 0.03
PHTF1-205ENST00000393357 POP7O75817 140 aaKnown RBP15.26■□□□□ 0.03
PHTF1-205ENST00000393357 TPMTP51580 245 aa15.26■□□□□ 0.03
PHTF1-205ENST00000393357 RNF165Q6ZSG1 346 aa15.26■□□□□ 0.03
PHTF1-205ENST00000393357 HDDC2Q7Z4H3 204 aa15.26■□□□□ 0.03
PHTF1-205ENST00000393357 CBARPQ8N350 705 aaPredicted RBP15.26■□□□□ 0.03
PHTF1-205ENST00000393357 OR5M1Q8NGP8 315 aa15.26■□□□□ 0.03
PHTF1-205ENST00000393357 ABHD4Q8TB40 342 aa15.26■□□□□ 0.03
PHTF1-205ENST00000393357 GLYATL1Q969I3 302 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms