RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CNTN1Q12860 1018 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF528Q3MIS6 628 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF628Q5EBL2 1059 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 C9orf57Q5W0N0 161 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 UNQ6126/PRO20091Q6UXV3 157 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 HIST3H2AQ7L7L0 130 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 CEACAM19Q7Z692 300 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 KLBQ86Z14 1044 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 CDK20Q8IZL9 346 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 HJURPQ8NCD3 748 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 GEMIN6Q8WXD5 167 aaKnown RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 SORCS1Q8WY21 1168 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 HIST1H2ACQ93077 130 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 LRIG1Q96JA1 1093 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 HHIPQ96QV1 700 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 BRINP2Q9C0B6 783 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 ACTL8Q9H568 366 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 FN3KRPQ9HA64 309 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 ZDHHC4Q9NPG8 344 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 MEPEQ9NQ76 525 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 EPHA6Q9UF33 1036 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 FKBPLQ9UIM3 349 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 PCDHB11Q9Y5F2 797 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 COL5A3P25940 1745 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 C13orf42A0A1B0GVH6 325 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 PPM1DO15297 605 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 VEGFDO43915 354 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 DUSP11O75319 330 aaKnown RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 YIF1AO95070 293 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 FABP4P15090 132 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 CXCL2P19875 107 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 TNFRSF1BP20333 461 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 RAB6AP20340 208 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 BDKRB2P30411 391 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 CRYBB2P43320 205 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 HNRNPKP61978 463 aaKnown RBP eCLIP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 CDK6Q00534 326 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 NFKB2Q00653 900 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 SLC10A7Q0GE19 358 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 HMGN3Q15651 99 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 RFTN2Q52LD8 501 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 RNF219Q5W0B1 726 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 CACUL1Q86Y37 369 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 SLC30A8Q8IWU4 369 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 L3MBTL4Q8NA19 623 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 OR1S1Q8NH92 325 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 GNPDA2Q8TDQ7 276 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 S100A16Q96FQ6 103 aaKnown RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 AGO3Q9H9G7 860 aaKnown RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 NTMQ9P121 344 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 PLEKHB1Q9UF11 243 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 GDF2Q9UK05 429 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 FBXL4Q9UKA2 621 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 RPH3ALQ9UNE2 315 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 PCDHB9Q9Y5E1 797 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 DDX60LQ5H9U9 1706 aaKnown RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 BCORQ6W2J9 1755 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 UBR3Q6ZT12 1888 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 NUDT19A8MXV4 375 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 GABRPO00591 440 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 FLRT2O43155 660 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 SLC7A4O43246 635 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF623O75123 536 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 CNMDO75829 334 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 F10P00742 488 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 GIMD1P0DJR0 217 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 CCL23P55773 120 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 SURF2Q15527 256 aaPredicted RBP7.17□□□□□ -1.26
VTI1A-201ENST00000393077 SEZ6L2Q6UXD5 910 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 RANBP3LQ86VV4 465 aaPredicted RBP7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF511Q8NB15 262 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 CD99L2Q8TCZ2 262 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 MYLIPQ8WY64 445 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 WNT8BQ93098 351 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ATG5Q9H1Y0 275 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 RDH14Q9HBH5 336 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 OR12D3Q9UGF7 316 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 PADI3Q9ULW8 664 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 COL1A2P08123 1366 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 OR51F1A6NGY5 319 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 RBBP9O75884 186 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 UBL3O95164 117 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 TSPAN15O95858 294 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ADAP00813 363 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 DCNP07585 359 aaKnown RBP7.17□□□□□ -1.26
VTI1A-201ENST00000393077 HCKP08631 526 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 IRF1P10914 325 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 CD1DP15813 335 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 PRDX3P30048 256 aaKnown RBP7.17□□□□□ -1.26
VTI1A-201ENST00000393077 CCND3P30281 292 aaPredicted RBP7.17□□□□□ -1.26
VTI1A-201ENST00000393077 CD80P33681 288 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 RABGGTBP53611 331 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ACTA2P62736 377 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ACTG2P63267 376 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ACTC1P68032 377 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ACTA1P68133 377 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 UBXN2BQ14CS0 331 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF239Q16600 458 aaKnown RBP7.17□□□□□ -1.26
VTI1A-201ENST00000393077 FBXO42Q6P3S6 717 aa7.17□□□□□ -1.26
VTI1A-201ENST00000393077 PEG10Q86TG7 708 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms