RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 RFKQ969G6 155 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 RBM18Q96H35 190 aaKnown RBP23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 UBQLN3Q9H347 655 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 QPCTLQ9NXS2 382 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 PEX16Q9Y5Y5 336 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 HYKKA2RU49 373 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 FUOMA2VDF0 154 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 HRO43593 1189 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 IFI30P13284 250 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 CPEP16870 476 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 DRD5P21918 477 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 ZNHIT3Q15649 155 aaPredicted RBP23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 PDZK1Q5T2W1 519 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 BRIX1Q8TDN6 353 aaKnown RBP23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 ATP13A2Q9NQ11 1180 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 SIDT1Q9NXL6 827 aaKnown RBP23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 MRPS33Q9Y291 106 aaKnown RBP23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 EXOSC1Q9Y3B2 195 aaKnown RBP23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 SPIN1Q9Y657 262 aaPredicted RBP23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 CSNK1G3Q9Y6M4 447 aa23.71■■□□□ 1.39
SMARCD3-203ENST00000392811 IGKV1D-16P01601 117 aa23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 RPS19P39019 145 aaKnown RBP23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 GABRA4P48169 554 aa23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 PPM1FP49593 454 aaPredicted RBP23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 BTG2P78543 158 aa23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 PRKCDQ05655 676 aa23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 CCDC85BQ15834 202 aaPredicted RBP23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 LRIT3Q3SXY7 679 aa23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 ZNF595Q8IYB9 648 aa23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 ZNF614Q8N883 585 aa23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 BBS1Q8NFJ9 593 aa23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 ABHD8Q96I13 439 aa23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 OR52D1Q9H346 318 aa23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 PRTFDC1Q9NRG1 225 aa23.7■■□□□ 1.38
SMARCD3-203ENST00000392811 OR2W5A6NFC9 320 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 SOX30O94993 753 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 NSA2O95478 260 aaKnown RBP23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 HMGN1P05114 100 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 LIMS3P0CW19 117 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 LIMS4P0CW20 117 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 GFERP55789 205 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 FXYD6P3P58550 94 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 IGLV3-21P80748 117 aaPredicted RBP23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 TMEM44Q2T9K0 475 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 FANK1Q8TC84 345 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 GATAD2BQ8WXI9 593 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 TM9SF4Q92544 642 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 VSTM2LQ96N03 204 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 ZNF285Q96NJ3 590 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 ZNF559Q9BR84 538 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 NUAK2Q9H093 628 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 MIR1-1HGQ9H1L0 117 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 IRAK4Q9NWZ3 460 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 FBXL21Q9UKT6 434 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 SSR3Q9UNL2 185 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 DTX4Q9Y2E6 619 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 CLDN16Q9Y5I7 305 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 THADAQ6YHU6 1953 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 ZNF670-ZNF695F2Z2N8 137 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 MLLT3P42568 568 aaPredicted RBP23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 BCAP31P51572 246 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 RACK1P63244 317 aaKnown RBP23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 FAM53BQ14153 422 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 METTL27Q8N6F8 245 aaPredicted RBP23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 OR6C4Q8NGE1 309 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 HS6ST2Q96MM7 605 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 TGM7Q96PF1 710 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 CD180Q99467 661 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 KCNS3Q9BQ31 491 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 CHRDQ9H2X0 955 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 C14orf105Q9NVL8 296 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 CBLCQ9ULV8 474 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 PLCL2Q9UPR0 1127 aa23.69■■□□□ 1.38
SMARCD3-203ENST00000392811 SPTBP11277 2137 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 UPK1BO75841 260 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 HNRNPCP07910 306 aaKnown RBP eCLIP23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 TSPAN19P0C672 248 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 TGM1P22735 817 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 ZNF45Q02386 682 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 ZNF267Q14586 743 aaPredicted RBP23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 DEFB133Q30KQ1 61 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 NXNL2Q5VZ03 156 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 ZNF613Q6PF04 617 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 PARP16Q8N5Y8 322 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 OR4F15Q8NGB8 312 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 FOXQ1Q9C009 403 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 ENKD1Q9H0I2 346 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 TMEM27Q9HBJ8 222 aa23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 HINT3Q9NQE9 182 aaKnown RBP23.68■■□□□ 1.38
SMARCD3-203ENST00000392811 CD79BP40259 229 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 BNC1Q01954 994 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 AMZ1Q400G9 498 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 LAPTM4BQ86VI4 370 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 C17orf82Q86X59 251 aaPredicted RBP23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 CPOQ8IVL8 374 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 MINDY2Q8NBR6 621 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 GRHL3Q8TE85 626 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 DGAT2Q96PD7 388 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 NELL2Q99435 816 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms