RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 MAPK14Q16539 360 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 DUSP5Q16690 384 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 ARHGAP11AQ6P4F7 1023 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 LINC01555Q8NAE3 123 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 BMFQ96LC9 184 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 WDR77Q9BQA1 342 aaPredicted RBP15.41■□□□□ 0.06
SNX9-201ENST00000392185 B3GNT4Q9C0J1 378 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 OR10A5Q9H207 317 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 DDX31Q9H8H2 851 aaKnown RBP15.41■□□□□ 0.06
SNX9-201ENST00000392185 SLC6A20Q9NP91 592 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 ST14Q9Y5Y6 855 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 RNF215Q9Y6U7 377 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 LOC285556D6RIA3 1793 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 CACNA1GO43497 2377 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 METTL12A8MUP2 240 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 TFAP2AP05549 437 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 TFPTP0C1Z6 253 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 CD1CP29017 333 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 SNX29P2Q8IUI4 249 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 NIPSNAP1Q9BPW8 284 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 ORAI3Q9BRQ5 295 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 PIGUQ9H490 435 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 HPF1Q9NWY4 346 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 FKBP7Q9Y680 259 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 PIGAP37287 484 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 ERVK-25P63136 954 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 VWA2Q5GFL6 755 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 ZNF367Q7RTV3 350 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 P4HA3Q7Z4N8 544 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 AMBRA1Q9C0C7 1298 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 NT5DC2Q9H857 520 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 RNF121Q9H920 327 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 UBQLN4Q9NRR5 601 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 SCN3AQ9NY46 2000 aa15.41■□□□□ 0.06
SNX9-201ENST00000392185 PTPRFP10586 1907 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 TRBV11-1A0A0K0K1C0 115 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 HOXB3P14651 431 aaPredicted RBP15.4■□□□□ 0.06
SNX9-201ENST00000392185 ENDOUP21128 410 aaKnown RBP15.4■□□□□ 0.06
SNX9-201ENST00000392185 TRIM23P36406 574 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 MNX1P50219 401 aaPredicted RBP15.4■□□□□ 0.06
SNX9-201ENST00000392185 CMPK2Q5EBM0 449 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 FAM180AQ6UWF9 173 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 SPRED1Q7Z699 444 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 THAP4Q8WY91 577 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 SLCO4A1Q96BD0 722 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 ULBP3Q9BZM4 244 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 WASH6PQ9NQA3 447 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 PCM1Q15154 2024 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 RLFQ13129 1914 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 FCMRO60667 390 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 IL20RBQ6UXL0 311 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 MAMDC2Q7Z304 686 aaPredicted RBP15.4■□□□□ 0.06
SNX9-201ENST00000392185 KLHDC8BQ8IXV7 354 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 SYT14Q8NB59 555 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 MAFAQ8NHW3 353 aaPredicted RBP15.4■□□□□ 0.06
SNX9-201ENST00000392185 BAHD1Q8TBE0 780 aaPredicted RBP15.4■□□□□ 0.06
SNX9-201ENST00000392185 DNAJA4Q8WW22 397 aaPredicted RBP15.4■□□□□ 0.06
SNX9-201ENST00000392185 CAPSLQ8WWF8 208 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 MCCC2Q9HCC0 563 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 RBM7Q9Y580 266 aaKnown RBP15.4■□□□□ 0.06
SNX9-201ENST00000392185 CTNSO60931 367 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 P04436 131 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 IFNA6P05013 189 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 CRHBPP24387 322 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 KCNJ5P48544 419 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 TUBA1BP68363 451 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 KEAP1Q14145 624 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 ANKDD1AQ495B1 522 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 PAPD4Q6PIY7 484 aaKnown RBP15.4■□□□□ 0.06
SNX9-201ENST00000392185 TUBA1AQ71U36 451 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 CEACAM19Q7Z692 300 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 UBE2Q1Q7Z7E8 422 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 RAB43Q86YS6 212 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 SYNPOQ8N3V7 929 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 AMER3Q8N944 861 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 CCDC74AQ96AQ1 378 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 OMA1Q96E52 524 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 MTCH2Q9Y6C9 303 aa15.4■□□□□ 0.06
SNX9-201ENST00000392185 NRG2O14511 850 aaPredicted RBP15.39■□□□□ 0.05
SNX9-201ENST00000392185 PAPLNO95428 1278 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 DHFRP00374 187 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 ZNF20P17024 532 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 BTG2P78543 158 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 SLC14A1Q13336 389 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 PIWIL3Q7Z3Z3 882 aaKnown RBP15.39■□□□□ 0.05
SNX9-201ENST00000392185 CNRIP1Q96F85 164 aaPredicted RBP15.39■□□□□ 0.05
SNX9-201ENST00000392185 TRBV2A0A0J9YWF9 115 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 SLC35E2P0CK97 266 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 F8A1P23610 371 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 RBMS1P29558 406 aaKnown RBP15.39■□□□□ 0.05
SNX9-201ENST00000392185 PLEKHG7Q6ZR37 379 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 FOXN4Q96NZ1 517 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 TMEM38AQ9H6F2 299 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 HEMK1Q9Y5R4 338 aaPredicted RBP15.39■□□□□ 0.05
SNX9-201ENST00000392185 CACNA1HO95180 2353 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 UBE2QL1A1L167 161 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 CELA2BP08218 269 aaPredicted RBP15.39■□□□□ 0.05
SNX9-201ENST00000392185 FOLR3P41439 243 aa15.39■□□□□ 0.05
SNX9-201ENST00000392185 KIR2DL1P43626 348 aaPredicted RBP15.39■□□□□ 0.05
SNX9-201ENST00000392185 BMXP51813 675 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms