RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CSNK1G2P78368 415 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 HMGCS1Q01581 520 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 AKAP17AQ02040 695 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 UBXN1Q04323 297 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC34A1Q06495 639 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PUDPQ08623 228 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ITKQ08881 620 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RALGDSQ12967 914 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 DDX10Q13206 875 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ERCC8Q13216 396 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CUL2Q13617 745 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 HES1Q14469 280 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SLMAPQ14BN4 828 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 EXOSC7Q15024 291 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 OXA1LQ15070 435 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CEBPEQ15744 281 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RAB30Q15771 203 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CHRNA6Q15825 494 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF77Q15935 545 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CAMK4Q16566 473 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 AANATQ16613 207 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 TIGD6Q17RP2 521 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RSPO1Q2MKA7 263 aaPredicted RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 C15orf59Q2T9L4 293 aaPredicted RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 C12orf74Q32Q52 190 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RFX4Q33E94 735 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 KRTAP25-1Q3LHN0 102 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM174BQ3ZCQ3 159 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 GPAT3Q53EU6 434 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 KLHL12Q53G59 568 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 UNC50Q53HI1 259 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SYT14P1Q58G82 188 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RAB41Q5JT25 222 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 TMEM69Q5SWH9 247 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 INTS11Q5TA45 600 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SEL1L2Q5TEA6 688 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ANKRD45Q5TZF3 282 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RNF220Q5VTB9 566 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 MEDAGQ5VYS4 303 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 IZUMO3Q5VZ72 239 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ANO1Q5XXA6 986 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 TMEM211Q6ICI0 200 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 OR2A2Q6IF42 318 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 TCEAL6Q6IPX3 200 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC25A25Q6KCM7 469 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ZFP1Q6P2D0 407 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 GGT6Q6P531 493 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 LYPD2Q6UXB3 125 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 HSDL2Q6YN16 418 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 TMPRSS11AQ6ZMR5 421 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 Q6ZS92 163 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 Q6ZTI0 123 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SEPT14Q6ZU15 432 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 STOX1Q6ZVD7 989 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 GSTA5Q7RTV2 222 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 OTOAQ7RTW8 1153 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 VN1R4Q7Z5H5 301 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SNX20Q7Z614 316 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CENPVQ7Z7K6 275 aaPredicted RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 NPM2Q86SE8 214 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 LCA5Q86VQ0 697 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 TRIM69Q86WT6 500 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 VRK2Q86Y07 508 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 MFN1Q8IWA4 741 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CCAR1Q8IX12 1150 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RNF168Q8IYW5 571 aaPredicted RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF679Q8IYX0 411 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ANKRD13AQ8IZ07 590 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SIDT2Q8NBJ9 832 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CCDC54Q8NEL0 328 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 OR51G2Q8NGK0 314 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 OR10G9Q8NGN4 311 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 OR9A4Q8NGU2 314 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 LILRB4Q8NHJ6 448 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RFESDQ8TAC1 157 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF420Q8TAQ5 688 aaPredicted RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ACER1Q8TDN7 264 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CD300LFQ8TDQ1 290 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 C15orf40Q8WUR7 153 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 TCP11Q8WWU5 503 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PLAC4Q8WY50 150 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 OR5P3Q8WZ94 311 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 SHC3Q92529 594 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RUBCNQ92622 972 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 GOLGA1Q92805 767 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RBPMSQ93062 196 aaKnown RBP-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 GTF3C6Q969F1 213 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 PNPLA2Q96AD5 504 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 MOB3AQ96BX8 217 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 HAVCR1Q96D42 359 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RAB3CQ96E17 227 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 MTMR8Q96EF0 704 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 RNF125Q96EQ8 232 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 WDR34Q96EX3 536 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 C16orf58Q96GQ5 468 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 ZC2HC1AQ96GY0 325 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CCDC34Q96HJ3 373 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 MRFAP1L1Q96HT8 127 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 AKR1E2Q96JD6 320 aa-0.53□□□□□ -2.49
TRAJ28-201ENST00000390509 CCDC114Q96M63 670 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms