RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 IKZF3Q9UKT9 509 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 DICER1Q9UPY3 1922 aaKnown RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 TAF1P21675 1872 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 SERPINE3A8MV23 424 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 NPIPA7E9PJI5 369 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 ZNHIT1O43257 154 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 HCN1O60741 890 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 CLDN9O95484 217 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 CALCAP01258 141 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 ATP1B1P05026 303 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 NPIPA8P0DM63 369 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 ANXA3P12429 323 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 DARSP14868 501 aaKnown RBP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 ACADSP16219 412 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 CCNOP22674 350 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 MMP11P24347 488 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 RRM2P31350 389 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 YWHABP31946 246 aaKnown RBP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 CDH5P33151 784 aaPredicted RBP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 AVPR1BP47901 424 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 RGS19P49795 217 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 EFNB2P52799 333 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 BLVRAP53004 296 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 ACLYP53396 1101 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 MLLT10P55197 1068 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 MYL6P60660 151 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 TNNC1P63316 161 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 CDH17Q12864 832 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 FOXI1Q12951 378 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 HNF4GQ14541 408 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 SF3B4Q15427 424 aaKnown RBP eCLIP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 INPP5JQ15735 1006 aaPredicted RBP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 CHI3L2Q15782 390 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 KNOP1Q1ED39 458 aaKnown RBP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 GPR157Q5UAW9 335 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 LCN1P1Q5VSP4 162 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 LEG1Q6P5S2 330 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 BHLHB9Q6PI77 547 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 ZNF554Q86TJ5 538 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 DCP1BQ8IZD4 617 aaKnown RBP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 LINC00518Q8N0U6 118 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 KRT222Q8N1A0 295 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 TEX26Q8N6G2 289 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 ZNF565Q8N9K5 539 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 RELL2Q8NC24 303 aaPredicted RBP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 OR4A15Q8NGL6 344 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 OR1J1Q8NGS3 322 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 ACMSDQ8TDX5 336 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 ADIPOR1Q96A54 375 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 ELMO2Q96JJ3 720 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 NEDD4LQ96PU5 975 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 IL4I1Q96RQ9 567 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 TIMP4Q99727 224 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 TUBGCP2Q9BSJ2 902 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 PRRG3Q9BZD7 231 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 MFFQ9GZY8 342 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 ILKAPQ9H0C8 392 aaPredicted RBP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 NSRP1Q9H0G5 558 aaKnown RBP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 RANBP3Q9H6Z4 567 aaPredicted RBP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 LY9Q9HBG7 655 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 CCNB1IP1Q9NPC3 277 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 KLRF1Q9NZS2 232 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 PRPF19Q9UMS4 504 aaKnown RBP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 NPIPA1Q9UND3 350 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 STARD10Q9Y365 291 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 PDS5AQ29RF7 1337 aaKnown RBP5.7□□□□□ -1.5
TRAV35-201ENST00000390462 DLEC1Q9Y238 1755 aa5.7□□□□□ -1.5
TRAV35-201ENST00000390462 RPAP1Q9BWH6 1393 aaPredicted RBP5.69□□□□□ -1.5
TRAV35-201ENST00000390462 ZMYM2Q9UBW7 1377 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 LRP5LA4QPB2 252 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 FBLL1A6NHQ2 334 aaKnown RBP5.69□□□□□ -1.5
TRAV35-201ENST00000390462 MID1O15344 667 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 B4GAT1O43505 415 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 NUAK1O60285 661 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 CLPTM1O96005 669 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 PEX11BO96011 259 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 FCER2P06734 321 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 P2RY1P47900 373 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 UQCRFS1P47985 274 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 RARRES1P49788 294 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 SLC26A2P50443 739 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 ARHGDIAP52565 204 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 LBX1P52954 281 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 IST1P53990 364 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 TUBA4AP68366 448 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 GPR18Q14330 331 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 MRPL23Q16540 153 aaKnown RBP5.69□□□□□ -1.5
TRAV35-201ENST00000390462 SNAI3Q3KNW1 292 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 ASPRV1Q53RT3 343 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 WASHC2DQ5SRD0 308 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 FNDC7Q5VTL7 733 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 C1orf189Q5VU69 101 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 AGAP7PQ5VUJ5 663 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 PAPD7Q5XG87 772 aaKnown RBP5.69□□□□□ -1.5
TRAV35-201ENST00000390462 Q6ZRG5 221 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 SLC24A5Q71RS6 500 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 PIWIL4Q7Z3Z4 852 aaKnown RBP5.69□□□□□ -1.5
TRAV35-201ENST00000390462 TRIM69Q86WT6 500 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 CCDC185Q8N715 623 aa5.69□□□□□ -1.5
TRAV35-201ENST00000390462 SYT8Q8NBV8 401 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms