RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CCDC116Q8IYX3 515 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 OR2L8Q8NGY9 312 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM204Q9BSN7 226 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 RNF19AQ9NV58 838 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF726A6NNF4 738 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF736B4DX44 427 aaPredicted RBP4.64□□□□□ -1.67
PCDH9-201ENST00000377861 AIPO00170 330 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 COCHO43405 550 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 LPLP06858 475 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 B3GNT8Q7Z7M8 397 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 OR10H4Q8NGA5 316 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 DVL1O14640 695 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 THBS2P35442 1172 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 DVL1P1P54792 670 aaPredicted RBP4.64□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM164Q5U3C3 297 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 C22orf39Q6P5X5 142 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 GTPBP3Q969Y2 492 aaKnown RBP4.64□□□□□ -1.67
PCDH9-201ENST00000377861 PDGFDQ9GZP0 370 aaPredicted RBP4.64□□□□□ -1.67
PCDH9-201ENST00000377861 NKIRAS2Q9NYR9 191 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 PNMA8BQ9ULN7 279 aaPredicted RBP4.64□□□□□ -1.67
PCDH9-201ENST00000377861 NPIPB13A6NJU9 1138 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 NPIPB4C9JG80 1138 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 FZD7O75084 574 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 SPARCP09486 303 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 CA8P35219 290 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 PRSS58Q8IYP2 241 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF561Q8N587 486 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 OR5AK2Q8NH90 309 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 SGK3Q96BR1 496 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 PRR14Q9BWN1 585 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 E5RGE8 158 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 FSHRP23945 695 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 CCDC71LQ8N9Z2 235 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 SH3RF2Q8TEC5 729 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 ORAI3Q9BRQ5 295 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 PRSS16Q9NQE7 514 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 ACOXLQ9NUZ1 547 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 NPPBP16860 134 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 CCKBRP32239 447 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 TLE4Q04727 773 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 ACSM3Q53FZ2 586 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 TTLL10Q6ZVT0 673 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 CCDC71Q8IV32 467 aaPredicted RBP4.64□□□□□ -1.67
PCDH9-201ENST00000377861 POGLUT1Q8NBL1 392 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 CORO2AQ92828 525 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 ALG8Q9BVK2 526 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 LOC102725191A0A1B0GVB3 256 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 PGA3P0DJD8 388 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 SORDQ00796 357 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 Q499Y3 187 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 PCDHGA6Q9Y5G7 932 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 CHD1O14646 1710 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 ANKRD34BA5PLL1 514 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 SPP1P10451 314 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM52BQ4KMG9 183 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 OR4F3Q6IEY1 312 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 OR6F1Q8NGZ6 308 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 SLC38A5Q8WUX1 472 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 SLC38A1Q9H2H9 487 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 CHD2O14647 1828 aaKnown RBP4.64□□□□□ -1.67
PCDH9-201ENST00000377861 TVP23AA6NH52 213 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 METTL15A6NJ78 407 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 FAM72CH0Y354 149 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 NID1P14543 1247 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 FAM72AQ5TYM5 149 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 FAM72DQ6L9T8 149 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 FAM72BQ86X60 149 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 C17orf47Q8NEP4 570 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 FNDC3AQ9Y2H6 1198 aaKnown RBP4.64□□□□□ -1.67
PCDH9-201ENST00000377861 NFKBIEO00221 500 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 SCGB2A1O75556 95 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 GPR4P46093 362 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 TCTEX1D1Q8N7M0 179 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 OR56B1Q8NGI3 324 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 RNF31Q96EP0 1072 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 TGFBR3Q03167 851 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 NLGN2Q8NFZ4 835 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 RIDAP52758 137 aaKnown RBP4.64□□□□□ -1.67
PCDH9-201ENST00000377861 CATSPEREQ5SY80 951 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 KCNJ15Q99712 375 aa4.64□□□□□ -1.67
PCDH9-201ENST00000377861 C14orf166Q9Y224 244 aaKnown RBP4.64□□□□□ -1.67
PCDH9-201ENST00000377861 STRAPQ9Y3F4 350 aaKnown RBP4.64□□□□□ -1.67
PCDH9-201ENST00000377861 ITPRIPL2Q3MIP1 535 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TEX261Q6UWH6 196 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 OR52P1PQ8NH57 321 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 LRRN4Q8WUT4 740 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 SLC9A6Q92581 669 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 GMEB2Q9UKD1 530 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 U3KQ87 197 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 CTNSO60931 367 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 FAM71E1Q6IPT2 247 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 DUS1LQ6P1R4 473 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM53Q6P2H8 277 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 USP53Q70EK8 1073 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ABHD4Q8TB40 342 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM239Q8WW34 195 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 IRF2BPLQ9H1B7 796 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 HTR1AP08908 422 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 SELENOVP59797 346 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 PTPRCAPQ14761 206 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms