RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 PDE7AQ13946 482 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 PDCD2Q16342 344 aaPredicted RBP17.22■□□□□ 0.35
CBWD3-204ENST00000377349 CPTPQ5TA50 214 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 IL23RQ5VWK5 629 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 RNF165Q6ZSG1 346 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 SLC16A11Q8NCK7 471 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 NUDT8Q8WV74 236 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 C1GALT1C1Q96EU7 318 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 SH3YL1Q96HL8 342 aaPredicted RBP17.22■□□□□ 0.35
CBWD3-204ENST00000377349 PIGQQ9BRB3 760 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 PINK1Q9BXM7 581 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 ZNF395Q9H8N7 513 aaPredicted RBP17.22■□□□□ 0.35
CBWD3-204ENST00000377349 ACSS1Q9NUB1 689 aaPredicted RBP17.22■□□□□ 0.35
CBWD3-204ENST00000377349 UQCRHLA0A096LP55 91 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 A0A1W2PRB8 838 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 OR2M5A3KFT3 312 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 TTC36A6NLP5 189 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 CFLARO15519 480 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 NDUFB5O43674 189 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 TNFRSF21O75509 655 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 LAMP1P11279 417 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 SOAT1P35610 550 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 CLDN20P56880 219 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 GANABQ14697 944 aaKnown RBP17.21■□□□□ 0.35
CBWD3-204ENST00000377349 LASP1Q14847 261 aaKnown RBP17.21■□□□□ 0.35
CBWD3-204ENST00000377349 DUSP5Q16690 384 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 MFSD12Q6NUT3 480 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 LRIG3Q6UXM1 1119 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 KRTCAP2Q8N6L1 136 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 FNDC9Q8TBE3 224 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 MTERF3Q96E29 417 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 PIK3IP1Q96FE7 263 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 ZNF845Q96IR2 970 aaPredicted RBP17.21■□□□□ 0.35
CBWD3-204ENST00000377349 ABCA1O95477 2261 aa17.21■□□□□ 0.35
CBWD3-204ENST00000377349 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 ARHGEF9O43307 516 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 TBX19O60806 448 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 SMPD2O60906 423 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 NKX2-2O95096 273 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 OXSR1O95747 527 aaPredicted RBP17.21■□□□□ 0.34
CBWD3-204ENST00000377349 SERPINB5P36952 375 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 RPL3P39023 403 aaKnown RBP17.21■□□□□ 0.34
CBWD3-204ENST00000377349 SERPINB4P48594 390 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 PRIM2P49643 509 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 ZNF844Q08AG5 666 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 C17orf67Q0P5P2 114 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 CHI3L2Q15782 390 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 ACKR1Q16570 336 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 XKR7Q5GH72 579 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 C6orf136Q5SQH8 315 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 APOOLQ6UXV4 268 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 ZNF550Q7Z398 422 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 ZAR1Q86SH2 424 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 IGFBPL1Q8WX77 278 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 PIGTQ969N2 578 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 FAM120BQ96EK7 910 aaKnown RBP17.21■□□□□ 0.34
CBWD3-204ENST00000377349 GIMAP5Q96F15 307 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 ZNF764Q96H86 408 aaPredicted RBP17.21■□□□□ 0.34
CBWD3-204ENST00000377349 MED18Q9BUE0 208 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 PARD6BQ9BYG5 372 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 ATAD3AQ9NVI7 634 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 GIN1Q9NXP7 522 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 ELOVL5Q9NYP7 299 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 ZNF226Q9NYT6 803 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 ZNF175Q9Y473 711 aa17.21■□□□□ 0.34
CBWD3-204ENST00000377349 H7C1Q1 480 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 TYROBPO43914 113 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 KCNK2O95069 426 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 C6orf47O95873 294 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 CD8BP10966 210 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 POU2F1P14859 743 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 SGCBQ16585 318 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 TMEM44Q2T9K0 475 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 PGS1Q32NB8 556 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 PRSS57Q6UWY2 283 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 PRIMA1Q86XR5 153 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 P3H2Q8IVL5 708 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 HOMEZQ8IX15 550 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 METTL25Q8N6Q8 603 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 ZNF610Q8N9Z0 462 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 OR4C3Q8NH37 302 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 OR5AK3PQ8NH89 298 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 CDS1Q92903 461 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 Q96MF0 132 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 PRPF18Q99633 342 aaKnown RBP17.2■□□□□ 0.34
CBWD3-204ENST00000377349 PAIP2Q9BPZ3 127 aaKnown RBP17.2■□□□□ 0.34
CBWD3-204ENST00000377349 UBTD1Q9HAC8 227 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 KCNK9Q9NPC2 374 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 FBXO34Q9NWN3 711 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 ATP6V1HQ9UI12 483 aa17.2■□□□□ 0.34
CBWD3-204ENST00000377349 CR1P17927 2039 aa17.19■□□□□ 0.34
CBWD3-204ENST00000377349 CHD3Q12873 2000 aaKnown RBP17.19■□□□□ 0.34
CBWD3-204ENST00000377349 FBN3Q75N90 2809 aa17.19■□□□□ 0.34
CBWD3-204ENST00000377349 C16orf97H3BN30 126 aa17.19■□□□□ 0.34
CBWD3-204ENST00000377349 SCDO00767 359 aa17.19■□□□□ 0.34
CBWD3-204ENST00000377349 ITM2AO43736 263 aa17.19■□□□□ 0.34
CBWD3-204ENST00000377349 AQP8O94778 261 aa17.19■□□□□ 0.34
CBWD3-204ENST00000377349 OPN1LWP04000 364 aa17.19■□□□□ 0.34
CBWD3-204ENST00000377349 HMGN2P05204 90 aaKnown RBP17.19■□□□□ 0.34
CBWD3-204ENST00000377349 IFI6P09912 130 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms