RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 TMEM44Q2T9K0 475 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 WDR88Q6ZMY6 472 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 ZAR1Q86SH2 424 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 LSRQ86X29 649 aaPredicted RBP18.75■□□□□ 0.59
VSX1-202ENST00000376709 ABCB10Q9NRK6 738 aa18.75■□□□□ 0.59
VSX1-202ENST00000376709 EXOSC1Q9Y3B2 195 aaKnown RBP18.75■□□□□ 0.59
VSX1-202ENST00000376709 HYKKA2RU49 373 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 UNC119BA6NIH7 251 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 SAGE2PA6NJ88 616 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 FMO6PO60774 539 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 IFI30P13284 250 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 PSG6Q00889 435 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 ZNF45Q02386 682 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 PRKCDQ05655 676 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 PLEKHG7Q6ZR37 379 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 RNF113BQ8IZP6 322 aaKnown RBP18.74■□□□□ 0.59
VSX1-202ENST00000376709 CLDN22Q8N7P3 220 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 MINDY2Q8NBR6 621 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 PFN4Q8NHR9 129 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 FANK1Q8TC84 345 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 GATAD2BQ8WXI9 593 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 CD180Q99467 661 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 KCNS3Q9BQ31 491 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 MRPS17Q9Y2R5 130 aaKnown RBP18.74■□□□□ 0.59
VSX1-202ENST00000376709 CSNK1G3Q9Y6M4 447 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 PNMA8CA0A1B0GUJ8 204 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 UPK1BO75841 260 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 SOX30O94993 753 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 MED26O95402 600 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 HMGN1P05114 100 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 CPEP16870 476 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 MAT1AQ00266 395 aaKnown RBP18.74■□□□□ 0.59
VSX1-202ENST00000376709 PDZK1Q5T2W1 519 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 LAPTM4BQ86VI4 370 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 OR52L1Q8NGH7 329 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 OTULINQ96BN8 352 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 ARSGQ96EG1 525 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 OR52D1Q9H346 318 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 FOLH1BQ9HBA9 442 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 C20orf141Q9NUB4 165 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 H2AFY2Q9P0M6 372 aaPredicted RBP18.74■□□□□ 0.59
VSX1-202ENST00000376709 FBXL21Q9UKT6 434 aa18.74■□□□□ 0.59
VSX1-202ENST00000376709 METTL12A8MUP2 240 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 FOXS1O43638 330 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 RPS19P39019 145 aaKnown RBP18.73■□□□□ 0.59
VSX1-202ENST00000376709 SPANXN2Q5MJ10 180 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 AADACL4Q5VUY2 407 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 CDK20Q8IZL9 346 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 PARP16Q8N5Y8 322 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 TMEM203Q969S6 136 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 TRMT61AQ96FX7 289 aaKnown RBP18.73■□□□□ 0.59
VSX1-202ENST00000376709 NELL2Q99435 816 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 NEURL2Q9BR09 285 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.73■□□□□ 0.59
VSX1-202ENST00000376709 MIR1-1HGQ9H1L0 117 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 UBQLN3Q9H347 655 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 TMEM27Q9HBJ8 222 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 C14orf105Q9NVL8 296 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 SOHLH2Q9NX45 425 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 SIDT1Q9NXL6 827 aaKnown RBP18.73■□□□□ 0.59
VSX1-202ENST00000376709 THADAQ6YHU6 1953 aa18.73■□□□□ 0.59
VSX1-202ENST00000376709 A0A1W2PR77 199 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 ZNF670-ZNF695F2Z2N8 137 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 CLDN4O14493 209 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 TBX1O43435 398 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 SLC2A10O95528 541 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 FUT1P19526 365 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 S1PR1P21453 382 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 SSTR4P31391 388 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 ATP6V1E1P36543 226 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 MLLT3P42568 568 aaPredicted RBP18.72■□□□□ 0.59
VSX1-202ENST00000376709 ZNF595Q8IYB9 648 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 BRIX1Q8TDN6 353 aaKnown RBP18.72■□□□□ 0.59
VSX1-202ENST00000376709 GRHL3Q8TE85 626 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 LMF2Q9BU23 707 aaKnown RBP18.72■□□□□ 0.59
VSX1-202ENST00000376709 RERGLQ9H628 205 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 ATP13A2Q9NQ11 1180 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 CRNNQ9UBG3 495 aaPredicted RBP18.72■□□□□ 0.59
VSX1-202ENST00000376709 ZNF223Q9UK11 482 aaPredicted RBP18.72■□□□□ 0.59
VSX1-202ENST00000376709 TGFBR3LH3BV60 316 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 CTNSO60931 367 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 BMP7P18075 431 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 MAKP20794 623 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 EMDP50402 254 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 ERV3-1Q14264 604 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 NXNL2Q5VZ03 156 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 SLC22A16Q86VW1 577 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 BBS1Q8NFJ9 593 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 OR4F15Q8NGB8 312 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 OR4N2Q8NGD1 307 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 CNOT9Q92600 299 aaKnown RBP18.72■□□□□ 0.59
VSX1-202ENST00000376709 HOXB13Q92826 284 aaPredicted RBP18.72■□□□□ 0.59
VSX1-202ENST00000376709 CEP19Q96LK0 163 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 HS6ST2Q96MM7 605 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 DGAT2Q96PD7 388 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 ZNF559Q9BR84 538 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 PRTFDC1Q9NRG1 225 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 SNTG1Q9NSN8 517 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 QPCTLQ9NXS2 382 aa18.72■□□□□ 0.59
VSX1-202ENST00000376709 MED31Q9Y3C7 131 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms