RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 REEP4Q9H6H4 257 aa13.35□□□□□ -0.27
CLCN6-204ENST00000376491 TMEM185BQ9H7F4 350 aa13.35□□□□□ -0.27
CLCN6-204ENST00000376491 OXSMQ9NWU1 459 aa13.35□□□□□ -0.27
CLCN6-204ENST00000376491 STOML1Q9UBI4 398 aa13.35□□□□□ -0.27
CLCN6-204ENST00000376491 BAIAP2L1Q9UHR4 511 aa13.35□□□□□ -0.27
CLCN6-204ENST00000376491 MCTS1Q9ULC4 181 aaKnown RBP13.35□□□□□ -0.27
CLCN6-204ENST00000376491 CADP27708 2225 aa13.35□□□□□ -0.27
CLCN6-204ENST00000376491 INAFM1C9JVW0 142 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 SLC28A1O00337 649 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 NID1P14543 1247 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 EFNA1P20827 205 aaPredicted RBP13.34□□□□□ -0.27
CLCN6-204ENST00000376491 SHC1P29353 583 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 MANFP55145 182 aaKnown RBP13.34□□□□□ -0.27
CLCN6-204ENST00000376491 ZNF844Q08AG5 666 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 PDE7AQ13946 482 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 VPS26BQ4G0F5 336 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 RFTN2Q52LD8 501 aaPredicted RBP13.34□□□□□ -0.27
CLCN6-204ENST00000376491 CFAP157Q5JU67 520 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 CCNJQ5T5M9 372 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 CPTPQ5TA50 214 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 ESPNLQ6ZVH7 1005 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 IFT20Q8IY31 132 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 GSPT2Q8IYD1 628 aaKnown RBP13.34□□□□□ -0.27
CLCN6-204ENST00000376491 OR6Y1Q8NGX8 325 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 CLHC1Q8NHS4 586 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 ZFP28Q8NHY6 868 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 ACTRT2Q8TDY3 377 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 PPCDCQ96CD2 204 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 ZBED6CLQ96FA7 236 aaPredicted RBP13.34□□□□□ -0.27
CLCN6-204ENST00000376491 SH3YL1Q96HL8 342 aaPredicted RBP13.34□□□□□ -0.27
CLCN6-204ENST00000376491 MS4A4EQ96PG1 132 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 MDFIQ99750 246 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 ACTR6Q9GZN1 396 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 ZNF701Q9NV72 531 aaPredicted RBP13.34□□□□□ -0.27
CLCN6-204ENST00000376491 PAQR5Q9NXK6 330 aaPredicted RBP13.34□□□□□ -0.27
CLCN6-204ENST00000376491 SH3BP4Q9P0V3 963 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 FIS1Q9Y3D6 152 aa13.34□□□□□ -0.27
CLCN6-204ENST00000376491 UQCRHLA0A096LP55 91 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 HS3ST1O14792 307 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 EFNA2O43921 213 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 SYNGR4O95473 234 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 SHBGP04278 402 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 LINGO3P0C6S8 592 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 CPA3P15088 417 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 PSMB1P20618 241 aaKnown RBP13.33□□□□□ -0.28
CLCN6-204ENST00000376491 AGTR1P30556 359 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 CRHR1P34998 444 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 RPL38P63173 70 aaKnown RBP13.33□□□□□ -0.28
CLCN6-204ENST00000376491 CCDC153Q494R4 210 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 HBMQ6B0K9 141 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 BEND4Q6ZU67 534 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 SZRD1Q7Z422 152 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 ZNF611Q8N823 705 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 B4GALNT2Q8NHY0 566 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 TMEM171Q8WVE6 324 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 ROBO4Q8WZ75 1007 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 OSTF1Q92882 214 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 C12orf49Q9H741 205 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 UBQLN4Q9NRR5 601 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 GLRX2Q9NS18 164 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 SIRT3Q9NTG7 399 aaPredicted RBP13.33□□□□□ -0.28
CLCN6-204ENST00000376491 ACSS1Q9NUB1 689 aaPredicted RBP13.33□□□□□ -0.28
CLCN6-204ENST00000376491 GPR52Q9Y2T5 361 aa13.33□□□□□ -0.28
CLCN6-204ENST00000376491 ANK3Q12955 4377 aaKnown RBP13.32□□□□□ -0.28
CLCN6-204ENST00000376491 A0A1W2PQD3 144 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 AZIN1O14977 448 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 OIP5O43482 229 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 RGS14O43566 566 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 NTN1O95631 604 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 ALOX5P09917 674 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 LINC00032P0C843 101 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 CCT5P48643 541 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 PRIM2P49643 509 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 ZNF41P51814 821 aaPredicted RBP13.32□□□□□ -0.28
CLCN6-204ENST00000376491 NR1H2P55055 460 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 FOXF1Q12946 379 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 TSC22D1Q15714 1073 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 LIPMQ5VYY2 423 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 RNF165Q6ZSG1 346 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 TRABD2AQ86V40 505 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 C10orf107Q8IVU9 208 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 CEP112Q8N8E3 955 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 COX18Q8N8Q8 333 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 CCDC63Q8NA47 563 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 LILRB1Q8NHL6 650 aaPredicted RBP13.32□□□□□ -0.28
CLCN6-204ENST00000376491 RAB3IL1Q8TBN0 382 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 ABHD3Q8WU67 409 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 FAM120BQ96EK7 910 aaKnown RBP13.32□□□□□ -0.28
CLCN6-204ENST00000376491 KLHL15Q96M94 604 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 RHOXF2Q9BQY4 288 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 GATA5Q9BWX5 397 aaPredicted RBP13.32□□□□□ -0.28
CLCN6-204ENST00000376491 SRXN1Q9BYN0 137 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 OR10A4Q9H209 315 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 HHATLQ9HCP6 504 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 ADAM21Q9UKJ8 722 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 DNAJC15Q9Y5T4 150 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 CR1P17927 2039 aa13.32□□□□□ -0.28
CLCN6-204ENST00000376491 CHD3Q12873 2000 aaKnown RBP13.32□□□□□ -0.28
CLCN6-204ENST00000376491 ABCA1O95477 2261 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 NPIPA5A0A0B4J1W7 369 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms