RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ENTPD2Q9Y5L3 495 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 LDB3O75112 727 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 ZNF10P21506 573 aaPredicted RBP13.02□□□□□ -0.33
MSH5-202ENST00000375740 PRKAR1BP31321 381 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 CDK5Q00535 292 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 C1orf61Q13536 156 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 NCF4Q15080 339 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 OCLNQ16625 522 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 TATDN3Q17R31 274 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 KIAA0895LQ68EN5 471 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 C19orf48Q6RUI8 117 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 FAM131AQ6UXB0 335 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 FRRS1Q6ZNA5 592 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 Q6ZS52 159 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 TAF8Q7Z7C8 310 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 KIF18BQ86Y91 864 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 OR5T3Q8NGG3 340 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 PCNPQ8WW12 178 aaKnown RBP13.02□□□□□ -0.33
MSH5-202ENST00000375740 TMEM80Q96HE8 168 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 EGLN3Q9H6Z9 239 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 UCKL1Q9NWZ5 548 aa13.02□□□□□ -0.33
MSH5-202ENST00000375740 RPL36Q9Y3U8 105 aaKnown RBP13.02□□□□□ -0.33
MSH5-202ENST00000375740 CKMT1AP12532 417 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 CSTF2P33240 577 aaKnown RBP eCLIP13.01□□□□□ -0.33
MSH5-202ENST00000375740 PTGS2P35354 604 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 PPP1CAP62136 330 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 PSPHP78330 225 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 SCN1BQ07699 218 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 TNK1Q13470 666 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 TRAM2Q15035 370 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 DUSP5Q16690 384 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 SLC35F1Q5T1Q4 408 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 MEDAGQ5VYS4 303 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 PLCZ1Q86YW0 608 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 TCTE3Q8IZS6 198 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 TMEM52Q8NDY8 209 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 GNPDA2Q8TDQ7 276 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 DIO2Q92813 273 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 SLC6A18Q96N87 628 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 GAS2L1Q99501 681 aaPredicted RBP13.01□□□□□ -0.33
MSH5-202ENST00000375740 TSSK6Q9BXA6 273 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 POLDIP3Q9BY77 421 aaKnown RBP13.01□□□□□ -0.33
MSH5-202ENST00000375740 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.01□□□□□ -0.33
MSH5-202ENST00000375740 MTHFD2LQ9H903 347 aaPredicted RBP13.01□□□□□ -0.33
MSH5-202ENST00000375740 LYRM4Q9HD34 91 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 ABCB9Q9NP78 766 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 STARD5Q9NSY2 213 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 KLHL28Q9NXS3 571 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 CLEC2DQ9UHP7 191 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 CLCA3PQ9Y6N3 262 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 BRWD1Q9NSI6 2320 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 ACP2P11117 423 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 GSTM3P21266 225 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 ALAS2P22557 587 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 MLLT1Q03111 559 aaPredicted RBP13.01□□□□□ -0.33
MSH5-202ENST00000375740 ZNF91Q05481 1191 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 SNTA1Q13424 505 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 PUS10Q3MIT2 529 aaKnown RBP13.01□□□□□ -0.33
MSH5-202ENST00000375740 CCNJQ5T5M9 372 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 TYW3Q6IPR3 259 aaKnown RBP13.01□□□□□ -0.33
MSH5-202ENST00000375740 SLC34A3Q8N130 599 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 FAM26EQ8N5C1 309 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 PLA2G12AQ9BZM1 189 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 MIXL1Q9H2W2 232 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 WDR45Q9Y484 360 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 ALG5Q9Y673 324 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 MTCH2Q9Y6C9 303 aa13.01□□□□□ -0.33
MSH5-202ENST00000375740 A0A0J9YY10 115 aa13□□□□□ -0.33
MSH5-202ENST00000375740 SPTY2D1-AS1A0A0U1RR47 76 aa13□□□□□ -0.33
MSH5-202ENST00000375740 FAM170BA6NMN3 283 aa13□□□□□ -0.33
MSH5-202ENST00000375740 ARHGEF9O43307 516 aa13□□□□□ -0.33
MSH5-202ENST00000375740 AGR2O95994 175 aa13□□□□□ -0.33
MSH5-202ENST00000375740 THEGLP0DJG4 465 aa13□□□□□ -0.33
MSH5-202ENST00000375740 CTRB1P17538 263 aa13□□□□□ -0.33
MSH5-202ENST00000375740 CCR5P51681 352 aa13□□□□□ -0.33
MSH5-202ENST00000375740 ST3GAL3Q11203 375 aa13□□□□□ -0.33
MSH5-202ENST00000375740 MAP4K2Q12851 820 aa13□□□□□ -0.33
MSH5-202ENST00000375740 ASAH1Q13510 395 aa13□□□□□ -0.33
MSH5-202ENST00000375740 FZD2Q14332 565 aa13□□□□□ -0.33
MSH5-202ENST00000375740 ARHGAP11BQ3KRB8 267 aa13□□□□□ -0.33
MSH5-202ENST00000375740 GLYR1Q49A26 553 aaPredicted RBP13□□□□□ -0.33
MSH5-202ENST00000375740 ZNF628Q5EBL2 1059 aa13□□□□□ -0.33
MSH5-202ENST00000375740 CTRB2Q6GPI1 263 aa13□□□□□ -0.33
MSH5-202ENST00000375740 ZNF730Q6ZMV8 503 aa13□□□□□ -0.33
MSH5-202ENST00000375740 MCHR1Q99705 422 aa13□□□□□ -0.33
MSH5-202ENST00000375740 GPR174Q9BXC1 333 aa13□□□□□ -0.33
MSH5-202ENST00000375740 TRIM45Q9H8W5 580 aaPredicted RBP13□□□□□ -0.33
MSH5-202ENST00000375740 HHATLQ9HCP6 504 aa13□□□□□ -0.33
MSH5-202ENST00000375740 GLTPQ9NZD2 209 aa13□□□□□ -0.33
MSH5-202ENST00000375740 PTGFRNQ9P2B2 879 aa13□□□□□ -0.33
MSH5-202ENST00000375740 KIR2DS5A0A0G2JLQ3 304 aa13□□□□□ -0.33
MSH5-202ENST00000375740 A0A0G2JNG1 304 aa13□□□□□ -0.33
MSH5-202ENST00000375740 SNTNA6NMZ2 147 aa13□□□□□ -0.33
MSH5-202ENST00000375740 KIR2DS3K7RE56 304 aa13□□□□□ -0.33
MSH5-202ENST00000375740 HCRTR1O43613 425 aa13□□□□□ -0.33
MSH5-202ENST00000375740 FGF17O60258 216 aa13□□□□□ -0.33
MSH5-202ENST00000375740 TSPAN9O75954 239 aa13□□□□□ -0.33
MSH5-202ENST00000375740 CLEC2LP0C7M8 214 aa13□□□□□ -0.33
MSH5-202ENST00000375740 CTSEP14091 401 aa13□□□□□ -0.33
MSH5-202ENST00000375740 GLULP15104 373 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms