RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 TNS1Q9HBL0 1735 aaKnown RBP16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 PRODHO43272 600 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 ZNF26P17031 533 aaPredicted RBP16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 GGT2P36268 569 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 DLX2Q07687 328 aaPredicted RBP16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 ADAM15Q13444 863 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 OR1Q1Q15612 314 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 ZNF385BQ569K4 471 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 EEF1A1P5Q5VTE0 462 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 AGBL5Q8NDL9 886 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 FOXN4Q96NZ1 517 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 RXFP3Q9NSD7 469 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 C14orf119Q9NWQ9 140 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 ZNF225Q9UK10 706 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 A0A1B0GVI7 797 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 GASTP01350 101 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 NR2C1P13056 603 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 TAS2R43P59537 309 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 AP3S2P59780 193 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 EEF1A2Q05639 463 aaKnown RBP16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 ZNF829Q3KNS6 432 aaPredicted RBP16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 ALG10Q5BKT4 473 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 IL20RBQ6UXL0 311 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 OR2A1Q8NGT9 310 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 OR14L1PQ8NHC6 308 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 DNAJA4Q8WW22 397 aaPredicted RBP16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 SGPP1Q9BX95 441 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 OR52D1Q9H346 318 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 EGLN3Q9H6Z9 239 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 ZNF443Q9Y2A4 671 aaPredicted RBP16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 PRKNO60260 465 aaPredicted RBP16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 CD1EP15812 388 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 TLE3Q04726 772 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 ABHD17BQ5VST6 288 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 CHDHQ8NE62 594 aaPredicted RBP16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 OR6T1Q8NGN1 323 aa16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 NFKBIL1Q9UBC1 381 aaPredicted RBP16.8■□□□□ 0.28
PTPDC1-202ENST00000375360 EFCAB7A8K855 629 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 PLRG1O43660 514 aaKnown RBP16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 OR3A3P47888 321 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 OR3A2P47893 321 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 PRAMEF8Q5VWM4 474 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 PRAMEF7Q5VXH5 474 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 ZNF554Q86TJ5 538 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 RBM45Q8IUH3 476 aaKnown RBP16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 ZNF595Q8IYB9 648 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 SPARTQ8N0X7 666 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 NEURL3Q96EH8 262 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 LRRC3BQ96PB8 259 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 CHIAQ9BZP6 476 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 ABCD2Q9UBJ2 740 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 OTOL1A6NHN0 477 aaPredicted RBP16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 ADH7P40394 386 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 PIWIL3Q7Z3Z3 882 aaKnown RBP16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 TOMM5Q8N4H5 51 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 PJA1Q8NG27 643 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 OR2T4Q8NH00 348 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 TCEAL2Q9H3H9 227 aaPredicted RBP16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 UBQLN4Q9NRR5 601 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 SNX11Q9Y5W9 270 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 TRBV11-1A0A0K0K1C0 115 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 A6NCN8 305 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 SOX3P41225 446 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 DAPP51397 102 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 PRSS36Q5K4E3 855 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 UBE2FQ969M7 185 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 PNPLA2Q96AD5 504 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 OR5B2Q96R09 309 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 ULBP3Q9BZM4 244 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 CDH10Q9Y6N8 788 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 FER1L6Q2WGJ9 1857 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 SPTBP11277 2137 aa16.79■□□□□ 0.28
PTPDC1-202ENST00000375360 A0A1W2PPC4 97 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 A0A1W2PQ72 361 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 OR2W5A6NFC9 320 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 TLCD2A6NGC4 264 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 TVP23AA6NH52 213 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 FXYD1O00168 92 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 ORC5O43913 435 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 FOLR3P41439 243 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 NFATC3Q12968 1075 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 SFXN5Q8TD22 340 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 TUBA1CQ9BQE3 449 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 SP140LQ9H930 580 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 IGHV3-20A0A0C4DH32 117 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 RBMXL2O75526 392 aaKnown RBP16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 CHMP24386 653 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 C14orf28Q4W4Y0 310 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 HSD17B12Q53GQ0 312 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 TLDC1Q6P9B6 456 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 PNLDC1Q8NA58 520 aaKnown RBP16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 CNN2Q99439 309 aaKnown RBP16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 ARID1AO14497 2285 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 SH3D21A4FU49 640 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 CER1O95813 267 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 CSTBP04080 98 aaKnown RBP16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 PAPD5Q8NDF8 572 aaKnown RBP16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 TMEM41AQ96HV5 264 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 EXTL2Q9UBQ6 330 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms