RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 OR2A12Q8NGT7 310 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ASF1BQ9NVP2 202 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 KLHL9Q9P2J3 617 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 C2orf74A8MZ97 194 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 GPX5O75715 221 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 SLC2A10O95528 541 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 HCCSP53701 268 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 YBX1P67809 324 aaKnown RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 CDK10Q15131 360 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 OR1Q1Q15612 314 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 CDKL4Q5MAI5 379 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 MEPCEQ7L2J0 689 aaKnown RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 DYNC2LI1Q8TCX1 351 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ADAMTS19Q8TE59 1207 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 A4GALTQ9NPC4 353 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 EIF3FO00303 357 aaPredicted RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 RLN2P04090 185 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 SOX18P35713 384 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 TIAL1Q01085 375 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ACVR1Q04771 509 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 SNTB2Q13425 540 aaKnown RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 MAPK14Q16539 360 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 GXYLT1Q4G148 440 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 L3MBTL4Q8NA19 623 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 NLGN4YQ8NFZ3 816 aaPredicted RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 OR5H6Q8NGV6 325 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 METTL21AQ8WXB1 218 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 TM4SF18Q96CE8 201 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 METTL2AQ96IZ6 378 aaKnown RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 COQ10AQ96MF6 247 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 TGM7Q96PF1 710 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 FYTTD1Q96QD9 318 aaKnown RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 GABARAPL3Q9BY60 117 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 NDRG4Q9ULP0 352 aaKnown RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 EEF1E1-BLOC1S5C9J1V9 151 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 KLK8O60259 260 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ADAM23O75077 832 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 PAHP00439 452 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 APEX1P27695 318 aaKnown RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 GABRA5P31644 462 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 LSSP48449 732 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ERVK-25P63136 954 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 C1orf94Q6P1W5 598 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 SLCO4C1Q6ZQN7 724 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 UBQLNLQ8IYU4 475 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 STOML3Q8TAV4 291 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF296Q8WUU4 475 aaPredicted RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 MVB12BQ9H7P6 319 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 INIPQ9NRY2 104 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 PLSCR3Q9NRY6 295 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 PARPBPQ9NWS1 579 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 NYNRINQ9P2P1 1898 aaKnown RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ETHE1O95571 254 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 NPR2P20594 1047 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ITGB7P26010 798 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 PSPHP78330 225 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 DSC1Q08554 894 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 SNTA1Q13424 505 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 C1orf61Q13536 156 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 PDE7AQ13946 482 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 NKAPLQ5M9Q1 402 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 FRMPD2BQ6IN97 320 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 REM2Q8IYK8 340 aaPredicted RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ELMOD3Q96FG2 381 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 TRMT2BQ96GJ1 504 aaKnown RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ZIC5Q96T25 663 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 CWH43Q9H720 699 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 LIPT1Q9Y234 373 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 SOX1O00570 391 aaPredicted RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 HCRTR2O43614 444 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 SSX4O60224 188 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 CREBL2O60519 120 aaPredicted RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 APOC3P02656 99 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ERP29P30040 261 aaKnown RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 LRIF1Q5T3J3 769 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 RPL13AP3Q6NVV1 102 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 DHRS4L2Q6PKH6 230 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 SLC35B4Q969S0 331 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 PCDHGB2Q9Y5G2 931 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 SIP14410 1827 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 H7C1C5 153 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 CACNG3O60359 315 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 PRKACBP22694 351 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 XCR1P46094 333 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 CLDN12P56749 244 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 LCN6P62502 163 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 SLC35A2P78381 396 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ACSM3Q53FZ2 586 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 FAM205BPQ63HN1 556 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 BHLHA9Q7RTU4 235 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 OR7G1Q8NGA0 311 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 MICU1Q9BPX6 476 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 SEMA4GQ9NTN9 838 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF225Q9UK10 706 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 PLEKHM1Q9Y4G2 1056 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 A0A0G2JMZ2 1700 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 LRRC37A2A6NM11 1700 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 CDHR4A6H8M9 788 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 TSPAN12O95859 305 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 PEX11BO96011 259 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms