RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 FBLIM1Q8WUP2 373 aa8.4□□□□□ -1.06
UBR4-201ENST00000375218 TAAR6Q96RI8 345 aa8.4□□□□□ -1.06
UBR4-201ENST00000375218 MS4A7Q9GZW8 240 aaPredicted RBP8.4□□□□□ -1.06
UBR4-201ENST00000375218 USE1Q9NZ43 259 aa8.4□□□□□ -1.06
UBR4-201ENST00000375218 ANKFY1Q9P2R3 1169 aa8.4□□□□□ -1.06
UBR4-201ENST00000375218 PHF11Q9UIL8 331 aa8.4□□□□□ -1.06
UBR4-201ENST00000375218 NXT1Q9UKK6 140 aaKnown RBP8.4□□□□□ -1.06
UBR4-201ENST00000375218 TIMM8AO60220 97 aaPredicted RBP8.4□□□□□ -1.07
UBR4-201ENST00000375218 TSPAN2O60636 221 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 GPIP06744 558 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 MALP21145 153 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 UCP3P55916 312 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 SESN2P58004 480 aaPredicted RBP8.4□□□□□ -1.07
UBR4-201ENST00000375218 STXBP1P61764 594 aaKnown RBP8.4□□□□□ -1.07
UBR4-201ENST00000375218 ARF6P62330 175 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 GTF2BQ00403 316 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 SLC17A1Q14916 467 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 TNXAQ16473 311 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 OR2A2Q6IF42 318 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 RHBDD2Q6NTF9 364 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 GPBP1Q86WP2 473 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 ZNF687Q8N1G0 1237 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 PQLC3Q8N755 202 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 OR2D3Q8NGH3 330 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 CMKLR1Q99788 373 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 PPA2Q9H2U2 334 aa8.4□□□□□ -1.07
UBR4-201ENST00000375218 TMEM265A0A087WTH1 108 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 HYKKA2RU49 373 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 CPED1A4D0V7 1026 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 RRASP10301 218 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 ARSAP15289 507 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 KLRC2P26717 231 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 DCKP27707 260 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 FMO3P31513 532 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 NEDD8Q15843 81 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 C6orf136Q5SQH8 315 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 LYSMD2Q8IV50 215 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 LRRC75A-AS1Q8N1F1 130 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 CCDC54Q8NEL0 328 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 SEMA6DQ8NFY4 1073 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 RIT1Q92963 219 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 SLC22A12Q96S37 553 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 RRAGCQ9HB90 399 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 SLC2A8Q9NY64 477 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 NFASCO94856 1347 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 TCRBV21S2A2A0A5A6 115 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 NKX6-3A6NJ46 265 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 SIX3O95343 332 aaPredicted RBP8.39□□□□□ -1.07
UBR4-201ENST00000375218 PROZP22891 400 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 YAP1P46937 504 aaKnown RBP8.39□□□□□ -1.07
UBR4-201ENST00000375218 UQCRFS1P47985 274 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 PJVKQ0ZLH3 352 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 HNF4GQ14541 408 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 PTCHD3Q3KNS1 767 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 PTPN20Q4JDL3 420 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 ATAD3CQ5T2N8 411 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 RHBDF2Q6PJF5 856 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 ZNF571Q7Z3V5 609 aaPredicted RBP8.39□□□□□ -1.07
UBR4-201ENST00000375218 CACUL1Q86Y37 369 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 APOBEC3FQ8IUX4 373 aaKnown RBP8.39□□□□□ -1.07
UBR4-201ENST00000375218 C1orf87Q8N0U7 546 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 WBP2Q969T9 261 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 PPWD1Q96BP3 646 aaKnown RBP8.39□□□□□ -1.07
UBR4-201ENST00000375218 UPF3AQ9H1J1 476 aaKnown RBP8.39□□□□□ -1.07
UBR4-201ENST00000375218 PLEK2Q9NYT0 353 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 BTBD3Q9Y2F9 522 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 FITM1A5D6W6 292 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 F5H5T6 163 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 POC1B-GALNT4F8VUJ3 575 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 DFFBO76075 338 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 SEC24AO95486 1093 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 ANKRD34CP0C6C1 535 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 NUTF2P61970 127 aaKnown RBP8.39□□□□□ -1.07
UBR4-201ENST00000375218 RPL23AP62750 156 aaKnown RBP8.39□□□□□ -1.07
UBR4-201ENST00000375218 LCN2P80188 198 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 TCTN1Q2MV58 587 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 HIST2H2BCQ6DN03 193 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 HIST2H2BDQ6DRA6 164 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 MRPL14Q6P1L8 145 aaKnown RBP8.39□□□□□ -1.07
UBR4-201ENST00000375218 LACC1Q8IV20 430 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 FBXO16Q8IX29 292 aaPredicted RBP8.39□□□□□ -1.07
UBR4-201ENST00000375218 CHDHQ8NE62 594 aaPredicted RBP8.39□□□□□ -1.07
UBR4-201ENST00000375218 ZCCHC10Q8TBK6 192 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 HHIPL1Q96JK4 782 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 ELOVL3Q9HB03 270 aa8.39□□□□□ -1.07
UBR4-201ENST00000375218 PQLC2LA1A4F0 135 aa8.38□□□□□ -1.07
UBR4-201ENST00000375218 H0Y980 276 aa8.38□□□□□ -1.07
UBR4-201ENST00000375218 ESRRBO95718 433 aa8.38□□□□□ -1.07
UBR4-201ENST00000375218 FUCA1P04066 466 aa8.38□□□□□ -1.07
UBR4-201ENST00000375218 CD3EP07766 207 aa8.38□□□□□ -1.07
UBR4-201ENST00000375218 ZNF44P15621 663 aa8.38□□□□□ -1.07
UBR4-201ENST00000375218 FPR3P25089 353 aa8.38□□□□□ -1.07
UBR4-201ENST00000375218 ARL2P36404 184 aa8.38□□□□□ -1.07
UBR4-201ENST00000375218 TNFSF9P41273 254 aa8.38□□□□□ -1.07
UBR4-201ENST00000375218 RPL5P46777 297 aaKnown RBP8.38□□□□□ -1.07
UBR4-201ENST00000375218 TPTEP56180 551 aa8.38□□□□□ -1.07
UBR4-201ENST00000375218 ADARB1P78563 741 aaKnown RBP8.38□□□□□ -1.07
UBR4-201ENST00000375218 PDIA2Q13087 525 aaKnown RBP8.38□□□□□ -1.07
UBR4-201ENST00000375218 TRAPPC5Q8IUR0 188 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms