RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ENTPD1P49961 510 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 HBA1P69905 142 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 CDK3Q00526 305 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 ZNF91Q05481 1191 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 DMPKQ09013 629 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 C2orf80Q0P641 193 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 CNTN1Q12860 1018 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 NPRL3Q12980 569 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 FHL1Q13642 323 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 SCARB2Q14108 478 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 NFE2L1Q14494 772 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 KCNAB1Q14722 419 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 C16orf72Q14CZ0 275 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 FAM78AQ5JUQ0 283 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.47□□□□□ -1.69
USP48-202ENST00000374730 SYT6Q5T7P8 510 aaPredicted RBP4.47□□□□□ -1.69
USP48-202ENST00000374730 PIP5KL1Q5T9C9 394 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 FAM46CQ5VWP2 391 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 MLIPQ5VWP3 458 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 ZNF852Q6ZMS4 543 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 ZNF517Q6ZMY9 492 aaPredicted RBP4.47□□□□□ -1.69
USP48-202ENST00000374730 FAM83HQ6ZRV2 1179 aaPredicted RBP4.47□□□□□ -1.69
USP48-202ENST00000374730 SLC16A12Q6ZSM3 486 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 PRSS48Q7RTY5 328 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 PAGE2Q7Z2X7 111 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 TSEN54Q7Z6J9 526 aaKnown RBP4.47□□□□□ -1.69
USP48-202ENST00000374730 GALNT10Q86SR1 603 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 PIP4P1Q86T03 277 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 SLC9B2Q86UD5 537 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 AMZ2Q86W34 360 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 C17orf64Q86WR6 236 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 ARMC8Q8IUR7 673 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 NAGSQ8N159 534 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 PARP8Q8N3A8 854 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 BPIFB6Q8NFQ5 453 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 OR10G2Q8NGC3 310 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 OR4K1Q8NGD4 311 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 OR10Q1Q8NGQ4 319 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 OR5K2Q8NHB8 316 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 CNIH3Q8TBE1 160 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 FAM81AQ8TBF8 368 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 FNDC8Q8TC99 324 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 GEMIN6Q8WXD5 167 aaKnown RBP4.47□□□□□ -1.69
USP48-202ENST00000374730 OR5P2Q8WZ92 322 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 SUSD6Q92537 303 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 SGCDQ92629 289 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 RORBQ92753 470 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 TANKQ92844 425 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 BADQ92934 168 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 TAMM41Q96BW9 452 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 PPP1R14BQ96C90 147 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 YIPF6Q96EC8 236 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 TPD52L3Q96J77 140 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 SNX22Q96L94 193 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 QRFPRQ96P65 431 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 ZNF300Q96RE9 604 aaPredicted RBP4.47□□□□□ -1.69
USP48-202ENST00000374730 AIF1LQ9BQI0 150 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 FUNDC2Q9BWH2 189 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 SORBS1Q9BX66 1292 aaKnown RBP4.47□□□□□ -1.69
USP48-202ENST00000374730 DGCR6LQ9BY27 220 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 ZNF717Q9BY31 904 aaPredicted RBP4.47□□□□□ -1.69
USP48-202ENST00000374730 KRTAP1-5Q9BYS1 174 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 MTIF3Q9H2K0 278 aaKnown RBP4.47□□□□□ -1.69
USP48-202ENST00000374730 SFXN1Q9H9B4 322 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 LTB4R2Q9NPC1 389 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 PLCXD1Q9NUJ7 323 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 TBC1D23Q9NUY8 699 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 NKIRAS2Q9NYR9 191 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 TAS2R9Q9NYW1 312 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 GDE1Q9NZC3 331 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 NDUFAF4Q9P032 175 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 SEMA5BQ9P283 1151 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 THAP10Q9P2Z0 257 aaPredicted RBP4.47□□□□□ -1.69
USP48-202ENST00000374730 ENOPH1Q9UHY7 261 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 ANGPT4Q9Y264 503 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 ASF1AQ9Y294 204 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 B3GNT3Q9Y2A9 372 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 POFUT2Q9Y2G5 429 aa4.47□□□□□ -1.69
USP48-202ENST00000374730 A0A1W2PRB8 838 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 TNFRSF11BO00300 401 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 PLPP1O14494 284 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 KMOO15229 486 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 XPNPEP2O43895 674 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 KCNJ13O60928 360 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 BCAS1O75363 584 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 SH3BGRLO75368 114 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 WBP4O75554 376 aaKnown RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 CLPXO76031 633 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 TBX6O95947 436 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 MT-ND2P03891 347 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 KLK1P06870 262 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 TMEM225BP0DP42 221 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 CYP4B1P13584 511 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 ETFAP13804 333 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 ZNF12P17014 697 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 ZNF182P17025 639 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 CBLP22681 906 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 UQCRC2P22695 453 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 NTSR1P30989 418 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 FMO3P31513 532 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms