RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 WNT4P56705 351 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 SIM1P81133 766 aaPredicted RBP12.34□□□□□ -0.43
A1CF-204ENST00000373997 EFNB1P98172 346 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 CDK10Q15131 360 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 PDZK1Q5T2W1 519 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 THOC7Q6I9Y2 204 aaKnown RBP12.34□□□□□ -0.43
A1CF-204ENST00000373997 WDR53Q7Z5U6 358 aaPredicted RBP12.34□□□□□ -0.43
A1CF-204ENST00000373997 RBM45Q8IUH3 476 aaKnown RBP12.34□□□□□ -0.43
A1CF-204ENST00000373997 RDH10Q8IZV5 341 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 VWA5B2Q8N398 1253 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 SUN3Q8TAQ9 357 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 FGF11Q92914 225 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 SLC35G5Q96KT7 338 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 ZNF582Q96NG8 517 aaPredicted RBP12.34□□□□□ -0.43
A1CF-204ENST00000373997 FNDC11Q9BVV2 318 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 MIXL1Q9H2W2 232 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 SYNDIG1Q9H7V2 258 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 ABCB9Q9NP78 766 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 TIGARQ9NQ88 270 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 KCMF1Q9P0J7 381 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 PLEKHB1Q9UF11 243 aaPredicted RBP12.34□□□□□ -0.43
A1CF-204ENST00000373997 CSNK1G3Q9Y6M4 447 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 ZNF780BQ9Y6R6 833 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 VPS13AQ96RL7 3174 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 FABP12A6NFH5 140 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 SGK494L7N484 410 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 AP3D1O14617 1153 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 PLD2O14939 933 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 TSPAN19P0C672 248 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 CSNK2A2P19784 350 aaPredicted RBP12.34□□□□□ -0.43
A1CF-204ENST00000373997 EPHA8P29322 1005 aaPredicted RBP12.34□□□□□ -0.43
A1CF-204ENST00000373997 SMSP52788 366 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 EPHA4P54764 986 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 SHC2P98077 582 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 CDK5Q00535 292 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 RAB40BQ12829 278 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 HNRNPA0Q13151 305 aaKnown RBP12.34□□□□□ -0.43
A1CF-204ENST00000373997 TPBGQ13641 420 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 GINS1Q14691 196 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 TBRG1Q3YBR2 411 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 ENTPD8Q5MY95 495 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 SNAP47Q5SQN1 464 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 C1orf94Q6P1W5 598 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 PAQR6Q6TCH4 344 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 TMEM107Q6UX40 140 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 C11orf74Q86VG3 221 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 OR4N5Q8IXE1 308 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 BBS10Q8TAM1 723 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 TCTN2Q96GX1 697 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 LRR1Q96L50 414 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 DEPDC7Q96QD5 511 aa12.34□□□□□ -0.43
A1CF-204ENST00000373997 ZCCHC3Q9NUD5 404 aaKnown RBP12.34□□□□□ -0.43
A1CF-204ENST00000373997 IGHV1OR21-1A0A087WYE8 117 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 A0A1W2PQL4 384 aaPredicted RBP12.33□□□□□ -0.44
A1CF-204ENST00000373997 SLC30A4O14863 429 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 CASC3O15234 703 aaKnown RBP12.33□□□□□ -0.44
A1CF-204ENST00000373997 NUDT21O43809 227 aaKnown RBP12.33□□□□□ -0.44
A1CF-204ENST00000373997 SCO2O43819 266 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 GALR3O60755 368 aaPredicted RBP12.33□□□□□ -0.44
A1CF-204ENST00000373997 RDH16O75452 317 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 ALPPP05187 535 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 MSL3P1P0C860 447 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 ACP2P11117 423 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 MMP11P24347 488 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 ETV5P41161 510 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 ETV1P50549 477 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 PRKAG1P54619 331 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 ID2Q02363 134 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 PIN1Q13526 163 aaPredicted RBP12.33□□□□□ -0.44
A1CF-204ENST00000373997 LTB4RQ15722 352 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 GPR19Q15760 415 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 C6orf183Q5T699 404 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 ZER1Q7Z7L7 766 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 IQCF1Q8N6M8 205 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 OR4K5Q8NGD3 323 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 OR9A2Q8NGT5 310 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 OR9A4Q8NGU2 314 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 SLC7A6Q92536 515 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 OTUB1Q96FW1 271 aaPredicted RBP12.33□□□□□ -0.44
A1CF-204ENST00000373997 ZDHHC12Q96GR4 267 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 C10orf90Q96M02 699 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 PRRC1Q96M27 445 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 ANKRA2Q9H9E1 313 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 BCL2L10Q9HD36 194 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 GSTK1Q9Y2Q3 226 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 EXOSC1Q9Y3B2 195 aaKnown RBP12.33□□□□□ -0.44
A1CF-204ENST00000373997 NOX1Q9Y5S8 564 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 SPIN1Q9Y657 262 aaPredicted RBP12.33□□□□□ -0.44
A1CF-204ENST00000373997 SLC22A7Q9Y694 548 aa12.33□□□□□ -0.44
A1CF-204ENST00000373997 POLR1CO15160 346 aaPredicted RBP12.32□□□□□ -0.44
A1CF-204ENST00000373997 PRODHO43272 600 aa12.32□□□□□ -0.44
A1CF-204ENST00000373997 DUX1O43812 170 aa12.32□□□□□ -0.44
A1CF-204ENST00000373997 TMCC2O75069 709 aa12.32□□□□□ -0.44
A1CF-204ENST00000373997 CSF3P09919 207 aa12.32□□□□□ -0.44
A1CF-204ENST00000373997 NR2F1P10589 423 aa12.32□□□□□ -0.44
A1CF-204ENST00000373997 GLB1P16278 677 aa12.32□□□□□ -0.44
A1CF-204ENST00000373997 TLX1P31314 330 aaPredicted RBP12.32□□□□□ -0.44
A1CF-204ENST00000373997 ANXA11P50995 505 aaKnown RBP12.32□□□□□ -0.44
A1CF-204ENST00000373997 GAS1P54826 345 aa12.32□□□□□ -0.44
A1CF-204ENST00000373997 MXD1Q05195 221 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms