RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 TPOP07202 933 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 CCNYL3P0C7X3 344 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 NPIPA8P0DM63 369 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 SPP1P10451 314 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 BCKDHAP12694 445 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 FPR1P21462 350 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 CEACAM6P40199 344 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 RPS14P62263 151 aaKnown RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 TSPAN31Q12999 210 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 ECH1Q13011 328 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 CDH18Q13634 790 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 MAD2L1BPQ15013 274 aaPredicted RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 OR8G1Q15617 311 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 AVPI1Q5T686 147 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 LPCAT3Q6P1A2 487 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 ZC3H14Q6PJT7 736 aaKnown RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 FAM111BQ6SJ93 734 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 SELENOHQ8IZQ5 122 aaKnown RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 LKAAEAR1Q8TD35 194 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 C16orf78Q8WTQ4 265 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 CHTF18Q8WVB6 975 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 CORO2AQ92828 525 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 VOPP1Q96AW1 172 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 FBRSQ9HAH7 460 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 GKN1Q9NS71 199 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 VNN3Q9NY84 501 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 NCDNQ9UBB6 729 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 CRLS1Q9UJA2 301 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 HS3ST2Q9Y278 367 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 PLXNA2O75051 1894 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 OR2A25A4D2G3 310 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 FAM86C2PA6NEL3 165 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 A8MXK9 166 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 KRT33AO76009 404 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 HEXAP06865 529 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 EFNA1P20827 205 aaPredicted RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 AOAHP28039 575 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 PTGFRP43088 359 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 EPHB3P54753 998 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 RAB25P57735 213 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 SNRPD1P62314 119 aaKnown RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 BLOC1S1P78537 153 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 SMAD3P84022 425 aaKnown RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 RASGEF1BQ0VAM2 473 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 PROX2Q3B8N5 592 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 TRIM60Q495X7 471 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 FAM151BQ6UXP7 276 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 DDX53Q86TM3 631 aaKnown RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 THOC6Q86W42 341 aaKnown RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 DNAJC22Q8N4W6 341 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 OR2AP1Q8NGE2 309 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 TCTEX1D2Q8WW35 142 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 ITPAQ9BY32 194 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 SLC6A16Q9GZN6 736 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 TMEM39AQ9NV64 488 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 NDRG4Q9ULP0 352 aaKnown RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 CORO2BQ9UQ03 480 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 MOKQ9UQ07 419 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 FCF1Q9Y324 198 aaKnown RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 PRSS21Q9Y6M0 314 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 A3GALT2U3KPV4 340 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 A0A087X0M5 115 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 A0A1B0GX30 115 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 C2orf78A6NCI8 922 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 TSTD3H0UI37 97 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 FFAR3O14843 346 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 GPR42O15529 346 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 LRRTM2O43300 516 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 HPGDSO60760 199 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 WBP4O75554 376 aaKnown RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 OR56A5P0C7T3 313 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 CYP4B1P13584 511 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 EPORP19235 508 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 FSHRP23945 695 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 DNASE1P24855 282 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 ADH6P28332 368 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 HSD11B1P28845 292 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 S100A3P33764 101 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 VEGFBP49765 207 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 DAPP51397 102 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 SLAMF1Q13291 335 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 GTF2H3Q13889 308 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 RBMS2Q15434 407 aaKnown RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 ZNF404Q494X3 552 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 RNASE10Q5GAN6 216 aaKnown RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 TMEM108Q6UXF1 575 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 SHFQ7M4L6 423 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 KRTCAP2Q8N6L1 136 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 ASB11Q8WXH4 323 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 SLC38A4Q969I6 547 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 MED8Q96G25 268 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 PITX2Q99697 317 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 EGFL8Q99944 293 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 ZNF2Q9BSG1 426 aaPredicted RBP7.72□□□□□ -1.17
GARNL3-201ENST00000373386 GGACTQ9BVM4 153 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 ALOXE3Q9BYJ1 711 aa7.72□□□□□ -1.17
GARNL3-201ENST00000373386 LOC730098B7Z3J9 87 aa7.71□□□□□ -1.18
GARNL3-201ENST00000373386 ITGA10O75578 1167 aa7.71□□□□□ -1.18
GARNL3-201ENST00000373386 MED26O95402 600 aa7.71□□□□□ -1.18
GARNL3-201ENST00000373386 ZNF682O95780 498 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms