RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PKDCCQ504Y2 493 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 HORMAD2Q8N7B1 307 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 FAM86B1Q8N7N1 296 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR4C15Q8NGM1 316 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR4K3Q96R72 315 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZBTB20Q9HC78 741 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 LRRTM2O43300 516 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 PLP2Q04941 152 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 RAB32Q13637 225 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 CDKN3Q16667 212 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 ODF4Q2M2E3 257 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 TMEM173Q86WV6 379 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 GRAMD2AQ8IUY3 354 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 RTP3Q9BQQ7 232 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 NAA11Q9BSU3 229 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 UBE2ZQ9H832 354 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 NTN4Q9HB63 628 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 PRSS16Q9NQE7 514 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 LRIT1Q9P2V4 623 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 LHX3Q9UBR4 397 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 CACNA1SQ13698 1873 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 CREBL2O60519 120 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 DHRS4L1P0CG22 281 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 OPRL1P41146 370 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 SNTB2Q13425 540 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 AARDQ4LEZ3 155 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 C14orf28Q4W4Y0 310 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR52E1Q8NGJ3 308 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 DIO2Q92813 273 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 ELSPBP1Q96BH3 223 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 BSCL2Q96G97 398 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF486Q96H40 463 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 WDR77Q9BQA1 342 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 POLDIP3Q9BY77 421 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 ARL6Q9H0F7 186 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 TEX13CA0A0J9YWL9 993 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZCWPW2A0A1B0GU75 182 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 FAM155AB1AL88 458 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 KCNK2O95069 426 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 RBMXP38159 391 aaKnown RBP12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 RNF144AP50876 292 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF140P52738 457 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 VWA5B2Q8N398 1253 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 TMEM151AQ8N4L1 468 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 TMIGD2Q96BF3 282 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 ELF4Q99607 663 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 RPS10P5Q9NQ39 176 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 CPNE7Q9UBL6 633 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 PPP1R3CQ9UQK1 317 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 CD8B2A6NJW9 211 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 SNAPINO95295 136 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 EGFP01133 1207 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 CD8BP10966 210 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 MAOBP27338 520 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 TAS2R38P59533 333 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 AFMIDQ63HM1 303 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF584Q8IVC4 421 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 CD200R1Q8TD46 325 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 C16orf78Q8WTQ4 265 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 EDAQ92838 391 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 CRB3Q9BUF7 120 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 PHF7Q9BWX1 381 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 CXCL16Q9H2A7 254 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 GPR83Q9NYM4 423 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 PAPPA2Q9BXP8 1791 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 KRBA1A5PL33 1030 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 NME4O00746 187 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF84P51523 738 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 CLDN8P56748 225 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 YPEL5P62699 121 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 FIP1L1Q6UN15 594 aaKnown RBP12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 C6orf120Q7Z4R8 191 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 LILRB4Q8NHJ6 448 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 DOK4Q8TEW6 326 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 FAM216AQ8WUB2 273 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 TMEM41AQ96HV5 264 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 UHRF1Q96T88 793 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 SCPEP1Q9HB40 452 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 CD300AQ9UGN4 299 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 ENPP5Q9UJA9 477 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 SRPK3Q9UPE1 567 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 C20orf202A1L168 122 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 PRAMEF2O60811 474 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 GPR37L1O60883 481 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 CD63P08962 238 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF888P0CJ79 500 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 FXYD6P3P58550 94 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 FOXK1P85037 733 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 CTBSQ01459 385 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 MRPL49Q13405 166 aaKnown RBP12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 PCK2Q16822 640 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF440Q8IYI8 595 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 ARFGAP1Q8N6T3 406 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 IGSF5Q9NSI5 407 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 SACM1LQ9NTJ5 587 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 TAAR2Q9P1P5 351 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 PCTPQ9UKL6 214 aa12.56□□□□□ -0.4
RAPGEF1-201ENST00000372189 BTN1A1Q13410 526 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 SERTAD2Q14140 314 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms