RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 KLHL26Q53HC5 615 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 BHLHB9Q6PI77 547 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 MISPQ8IVT2 679 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 CHDHQ8NE62 594 aaPredicted RBP17.1■□□□□ 0.33
CKS1B-203ENST00000368439 GOT1L1Q8NHS2 421 aaPredicted RBP17.1■□□□□ 0.33
CKS1B-203ENST00000368439 PIWIL2Q8TC59 973 aaKnown RBP17.1■□□□□ 0.33
CKS1B-203ENST00000368439 MIPOL1Q8TD10 442 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 SDF2Q99470 211 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 PIGQQ9BRB3 760 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 HHATLQ9HCP6 504 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 JKAMPQ9P055 326 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 CREBBPQ92793 2442 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 C9JVG2 144 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 SCDO00767 359 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 OIP5O43482 229 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 TGM6O95932 706 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 C1QCP02747 245 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 TMIGD3P0DMS9 266 aaPredicted RBP17.09■□□□□ 0.33
CKS1B-203ENST00000368439 POU3F2P20265 443 aaPredicted RBP17.09■□□□□ 0.33
CKS1B-203ENST00000368439 UQCRC2P22695 453 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 PSMA4P25789 261 aaKnown RBP17.09■□□□□ 0.33
CKS1B-203ENST00000368439 ASCL1P50553 236 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 AGFG1P52594 562 aaKnown RBP17.09■□□□□ 0.33
CKS1B-203ENST00000368439 DGKQP52824 942 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 ATP12AP54707 1039 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 CLDN20P56880 219 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 KRTAP10-9P60411 292 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 SAXO2Q658L1 398 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 MTERF4Q7Z6M4 381 aaKnown RBP17.09■□□□□ 0.33
CKS1B-203ENST00000368439 ACTRT2Q8TDY3 377 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 SLC35G5Q96KT7 338 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 CCDC115Q96NT0 180 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 TM9SF2Q99805 663 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 HOXD1Q9GZZ0 328 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 BTNL2Q9UIR0 455 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 PCDHGB4Q9UN71 923 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 VDAC3Q9Y277 283 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 L3MBTL1Q9Y468 752 aa17.09■□□□□ 0.33
CKS1B-203ENST00000368439 A0A087WZY1 265 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 C7orf72A4D263 438 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 H3BML4 177 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 HPGDP15428 266 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 ZNF17P17021 662 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 ATP6V1C1P21283 382 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 S100A3P33764 101 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 OPRM1P35372 400 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 ZNF117Q03924 483 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 PLPPR5Q32ZL2 321 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 HEPHL1Q6MZM0 1159 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 GGNQ86UU5 652 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 UBQLNLQ8IYU4 475 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 GTPBP8Q8N3Z3 284 aaPredicted RBP17.08■□□□□ 0.32
CKS1B-203ENST00000368439 VPS37AQ8NEZ2 397 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 B4GALNT2Q8NHY0 566 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 POC1BQ8TC44 478 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 SH3YL1Q96HL8 342 aaPredicted RBP17.08■□□□□ 0.32
CKS1B-203ENST00000368439 LURAP1Q96LR2 239 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 ZFP3Q96NJ6 502 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 OR52B2Q96RD2 323 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 OR51I1Q9H343 314 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 MED17Q9NVC6 651 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 KCNE5Q9UJ90 142 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 ICAM5Q9UMF0 924 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 AP4B1Q9Y6B7 739 aa17.08■□□□□ 0.32
CKS1B-203ENST00000368439 DUXAA6NLW8 204 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 FCMRO60667 390 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 PGRP06401 933 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 RNF144AP50876 292 aaPredicted RBP17.07■□□□□ 0.32
CKS1B-203ENST00000368439 CASP9P55211 416 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 TLE4Q04727 773 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 ARHGAP11BQ3KRB8 267 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 FLYWCH1Q4VC44 716 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 PDCD4Q53EL6 469 aaKnown RBP17.07■□□□□ 0.32
CKS1B-203ENST00000368439 AP1ARQ63HQ0 302 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 CBLN3Q6UW01 205 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 OLIG3Q7RTU3 272 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 MEIOBQ8N635 442 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 METTL25Q8N6Q8 603 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 FIG4Q92562 907 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 RNASE6Q93091 150 aaKnown RBP17.07■□□□□ 0.32
CKS1B-203ENST00000368439 INTS12Q96CB8 462 aaKnown RBP17.07■□□□□ 0.32
CKS1B-203ENST00000368439 NEURL3Q96EH8 262 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 C7orf26Q96N11 449 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 VIPAS39Q9H9C1 493 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 KCNN3Q9UGI6 736 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 DTNAQ9Y4J8 743 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 POLQO75417 2590 aa17.07■□□□□ 0.32
CKS1B-203ENST00000368439 ANKHD1Q8IWZ3 2542 aaKnown RBP17.07■□□□□ 0.32
CKS1B-203ENST00000368439 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 CENPVL1A0A0U1RR11 272 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 SEC14L5O43304 696 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 TNFRSF21O75509 655 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 TNFSF13O75888 250 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 AK1P00568 194 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 LINGO3P0C6S8 592 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 IDO1P14902 403 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 CDKN2CP42773 168 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 FUT5Q11128 374 aa17.06■□□□□ 0.32
CKS1B-203ENST00000368439 SNTB1Q13884 538 aaKnown RBP17.06■□□□□ 0.32
CKS1B-203ENST00000368439 NXNQ6DKJ4 435 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms