RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 MED26O95402 600 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 PROS1P07225 676 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 TYRP1P17643 537 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 GALNSP34059 522 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 GABRA3P34903 492 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 SOX18P35713 384 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 SNRPNP63162 240 aaKnown RBP13.01□□□□□ -0.33
USF1-202ENST00000368020 IGLV3-21P80748 117 aaPredicted RBP13.01□□□□□ -0.33
USF1-202ENST00000368020 ID2Q02363 134 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 STX4Q12846 297 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 C1orf61Q13536 156 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 KRR1Q13601 381 aaKnown RBP13.01□□□□□ -0.33
USF1-202ENST00000368020 SSX1Q16384 188 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 ZNF181Q2M3W8 571 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 PGGHGQ32M88 737 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 NXNL2Q5VZ03 156 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 LYSMD4Q5XG99 296 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 GID4Q8IVV7 300 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 NKAIN4Q8IVV8 208 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 CARFQ8N187 725 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 GALNT6Q8NCL4 622 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 OR5T3Q8NGG3 340 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 ZNF285Q96NJ3 590 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 CD180Q99467 661 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 SLC38A3Q99624 504 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 CENPOQ9BU64 300 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 C6orf62Q9GZU0 229 aaPredicted RBP13.01□□□□□ -0.33
USF1-202ENST00000368020 FN3KQ9H479 309 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 TMEM27Q9HBJ8 222 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 HHATLQ9HCP6 504 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 H2AFY2Q9P0M6 372 aaPredicted RBP13.01□□□□□ -0.33
USF1-202ENST00000368020 PLCL2Q9UPR0 1127 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 UGT2A1Q9Y4X1 527 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 SCN2AQ99250 2005 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 SURF4O15260 269 aa13□□□□□ -0.33
USF1-202ENST00000368020 BCAT2O15382 392 aaPredicted RBP13□□□□□ -0.33
USF1-202ENST00000368020 ZNF749O43361 778 aa13□□□□□ -0.33
USF1-202ENST00000368020 PRAMEF2O60811 474 aa13□□□□□ -0.33
USF1-202ENST00000368020 DNAJB6O75190 326 aa13□□□□□ -0.33
USF1-202ENST00000368020 RCBTB2O95199 551 aa13□□□□□ -0.33
USF1-202ENST00000368020 CPEP16870 476 aa13□□□□□ -0.33
USF1-202ENST00000368020 MAOBP27338 520 aa13□□□□□ -0.33
USF1-202ENST00000368020 HOXD12P35452 270 aa13□□□□□ -0.33
USF1-202ENST00000368020 ETV6P41212 452 aa13□□□□□ -0.33
USF1-202ENST00000368020 AFF3P51826 1226 aaKnown RBP13□□□□□ -0.33
USF1-202ENST00000368020 EPHA4P54764 986 aa13□□□□□ -0.33
USF1-202ENST00000368020 HNRNPKP61978 463 aaKnown RBP eCLIP13□□□□□ -0.33
USF1-202ENST00000368020 DSG2Q14126 1118 aa13□□□□□ -0.33
USF1-202ENST00000368020 ZNF554Q86TJ5 538 aa13□□□□□ -0.33
USF1-202ENST00000368020 CMIPQ8IY22 773 aa13□□□□□ -0.33
USF1-202ENST00000368020 ARL14Q8N4G2 192 aa13□□□□□ -0.33
USF1-202ENST00000368020 POGLUT1Q8NBL1 392 aa13□□□□□ -0.33
USF1-202ENST00000368020 TMEM52Q8NDY8 209 aa13□□□□□ -0.33
USF1-202ENST00000368020 OR9A4Q8NGU2 314 aa13□□□□□ -0.33
USF1-202ENST00000368020 TMEM255BQ8WV15 326 aa13□□□□□ -0.33
USF1-202ENST00000368020 RNFT2Q96EX2 444 aa13□□□□□ -0.33
USF1-202ENST00000368020 G6PC3Q9BUM1 346 aa13□□□□□ -0.33
USF1-202ENST00000368020 JAM3Q9BX67 310 aa13□□□□□ -0.33
USF1-202ENST00000368020 RAB33BQ9H082 229 aa13□□□□□ -0.33
USF1-202ENST00000368020 FAM60AQ9NP50 221 aa13□□□□□ -0.33
USF1-202ENST00000368020 SUSD2Q9UGT4 822 aa13□□□□□ -0.33
USF1-202ENST00000368020 DAPK2Q9UIK4 370 aa13□□□□□ -0.33
USF1-202ENST00000368020 SLCO1B1Q9Y6L6 691 aa13□□□□□ -0.33
USF1-202ENST00000368020 TLCD2A6NGC4 264 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 UNC119BA6NIH7 251 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 SLC9B1P1A6NJY1 282 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 CBX7O95931 251 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 GNSP15586 552 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 BMP7P18075 431 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 DRD5P21918 477 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 GRK5P34947 590 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 MLLT3P42568 568 aaPredicted RBP12.99□□□□□ -0.33
USF1-202ENST00000368020 RBM34P42696 430 aaKnown RBP12.99□□□□□ -0.33
USF1-202ENST00000368020 CDH11P55287 796 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 HSD17B7P56937 341 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 BNC1Q01954 994 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 SLC13A2Q13183 592 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 OXA1LQ15070 435 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 OR1Q1Q15612 314 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 FLYWCH1Q4VC44 716 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 CCNJQ5T5M9 372 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 LAPTM4BQ86VI4 370 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 PSD4Q8NDX1 1056 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 OR52R1Q8NGF1 315 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 OR8D4Q8NGM9 314 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 TMEM239Q8WW34 195 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 PIK3R3Q92569 461 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 RIT1Q92963 219 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 COQ7Q99807 217 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 CDADC1Q9BWV3 514 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 TRIM2Q9C040 744 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 NUAK2Q9H093 628 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 MIR1-1HGQ9H1L0 117 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.99□□□□□ -0.33
USF1-202ENST00000368020 TMEM74BQ9NUR3 256 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 BAIAP2Q9UQB8 552 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 MED31Q9Y3C7 131 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 TNRC6BQ9UPQ9 1833 aaKnown RBP12.99□□□□□ -0.33
USF1-202ENST00000368020 ZNF670-ZNF695F2Z2N8 137 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 H0YIG0 161 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms