RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 PRICKLE4Q2TBC4 344 aa11.76□□□□□ -0.53
GGPS1-202ENST00000358966 FAM209BQ5JX69 171 aa11.76□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF691Q5VV52 312 aa11.76□□□□□ -0.53
GGPS1-202ENST00000358966 TTC23Q5W5X9 447 aa11.76□□□□□ -0.53
GGPS1-202ENST00000358966 GUSBP11Q6P575 273 aa11.76□□□□□ -0.53
GGPS1-202ENST00000358966 BHLHB9Q6PI77 547 aa11.76□□□□□ -0.53
GGPS1-202ENST00000358966 IL17RDQ8NFM7 739 aa11.76□□□□□ -0.53
GGPS1-202ENST00000358966 PDE7BQ9NP56 450 aa11.76□□□□□ -0.53
GGPS1-202ENST00000358966 GMPPBQ9Y5P6 360 aa11.76□□□□□ -0.53
GGPS1-202ENST00000358966 PEX12O00623 359 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 DNAJB5O75953 348 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 RPP38P78345 283 aaKnown RBP11.75□□□□□ -0.53
GGPS1-202ENST00000358966 MGAT2Q10469 447 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 NPRL3Q12980 569 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 MAPK14Q16539 360 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 ZC3H12BQ5HYM0 836 aaKnown RBP11.75□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF311Q5JNZ3 666 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 FHL5Q5TD97 284 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 C1orf189Q5VU69 101 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 STEAP3Q658P3 488 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 PMS2CLQ68D20 193 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 FRRS1Q6ZNA5 592 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF704Q6ZNC4 412 aaPredicted RBP11.75□□□□□ -0.53
GGPS1-202ENST00000358966 FANK1Q8TC84 345 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 SLC7A13Q8TCU3 470 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 CCDC74AQ96AQ1 378 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 ST6GAL2Q96JF0 529 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 FUNDC2Q9BWH2 189 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 ZSCAN32Q9NX65 697 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 SPACA6W5XKT8 324 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 TBX1O43435 398 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 CPNE3O75131 537 aaKnown RBP11.75□□□□□ -0.53
GGPS1-202ENST00000358966 SERPINI2O75830 405 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 UPK1BO75841 260 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 PDGFAP04085 211 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 HTR1AP08908 422 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 RHCEP18577 417 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 POU1F1P28069 291 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 IDH2P48735 452 aaKnown RBP11.75□□□□□ -0.53
GGPS1-202ENST00000358966 PPP5CP53041 499 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 RAB38P57729 211 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 MICAQ29983 383 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF544Q6NX49 715 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 ARSKQ6UWY0 536 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 OR52R1Q8NGF1 315 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 NRBF2Q96F24 287 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 MESP1Q9BRJ9 268 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 FBXO8Q9NRD0 319 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 A4GNTQ9UNA3 340 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 CLDN16Q9Y5I7 305 aa11.75□□□□□ -0.53
GGPS1-202ENST00000358966 ISPDA4D126 451 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 CPSF4LA6NMK7 179 aaKnown RBP11.74□□□□□ -0.53
GGPS1-202ENST00000358966 GDF9O60383 454 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 OR2B3O76000 313 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 CBX7O95931 251 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 ATP1B1P05026 303 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 ELAVL4P26378 380 aaKnown RBP11.74□□□□□ -0.53
GGPS1-202ENST00000358966 CD1CP29017 333 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 HTR3AP46098 478 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 LIMS1P48059 325 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 HLCSP50747 726 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 EFNA3P52797 238 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 TOP3AQ13472 1001 aaPredicted RBP11.74□□□□□ -0.53
GGPS1-202ENST00000358966 SHISA6Q6ZSJ9 500 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 SLC16A12Q6ZSM3 486 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 KRT73Q86Y46 540 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 OR6Q1Q8NGQ2 317 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 GPR151Q8TDV0 419 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 ST8SIA2Q92186 375 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 FBXW5Q969U6 566 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 FKBP10Q96AY3 582 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 CNPPD1Q9BV87 410 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 TEKT2Q9UIF3 430 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 LAMTOR5O43504 91 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 UGT2B11O75310 529 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 PDE9AO76083 593 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 ITGA2P17301 1181 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 CRHBPP24387 322 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 TRHRP34981 398 aaPredicted RBP11.74□□□□□ -0.53
GGPS1-202ENST00000358966 ARRB1P49407 418 aaPredicted RBP11.74□□□□□ -0.53
GGPS1-202ENST00000358966 STX4Q12846 297 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 HLA-BQ31612 363 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 PLK5Q496M5 336 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 C6orf141Q5SZD1 244 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 XAF1Q6GPH4 301 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 CDC73Q6P1J9 531 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 OR51Q1Q8NH59 317 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 OR1L3Q8NH93 324 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 ZDHHC12Q96GR4 267 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 ALOXE3Q9BYJ1 711 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 GLTPQ9NZD2 209 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 KCNE5Q9UJ90 142 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 PLCL2Q9UPR0 1127 aa11.74□□□□□ -0.53
GGPS1-202ENST00000358966 NUDT21O43809 227 aaKnown RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 OR10H3O60404 316 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 SRPX2O60687 465 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 GKN3PP0CG01 181 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 TDGF1P13385 188 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 GLB1P16278 677 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 GABRA3P34903 492 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms