RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 IL17RBQ9NRM6 502 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ASF1BQ9NVP2 202 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PAK1IP1Q9NWT1 392 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 NRXN3Q9Y4C0 1643 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 YJEFN3A6XGL0 299 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 LDB3O75112 727 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 TRMUO75648 421 aaKnown RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SC5DO75845 299 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PORP16435 677 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 HTR2AP28223 471 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 HOXA10P31260 410 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PTH2RP49190 550 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 HACD4Q5VWC8 232 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 RNLSQ5VYX0 342 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SSX7Q7RTT5 188 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 CCDC71Q8IV32 467 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 DTWD1Q8N5C7 304 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 CPEB3Q8NE35 698 aaKnown RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 OR52P1PQ8NH57 321 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 TMEM80Q96HE8 168 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 TIMP4Q99727 224 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 KATNB1Q9BVA0 655 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 MCOLN1Q9GZU1 580 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PCDHAC1Q9H158 963 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 FAM124BQ9H5Z6 455 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 AKTIPQ9H8T0 292 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 NMNAT1Q9HAN9 279 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ASIC5Q9NY37 505 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 POMPQ9Y244 141 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 COL5A2P05997 1499 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 IQGAP1P46940 1657 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 FANCGO15287 622 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 FMO6PO60774 539 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ALOX12BO75342 701 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SIX3O95343 332 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 DDAH2O95865 285 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 IL3P08700 152 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 HLA-DOBP13765 273 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 CD9P21926 228 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 IL4RP24394 825 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 MAT1AQ00266 395 aaKnown RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ROR2Q01974 943 aaKnown RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SLC39A5Q6ZMH5 540 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 Q6ZVL8 140 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PDZD9Q8IXQ8 264 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 FBXL14Q8N1E6 418 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ENDOVQ8N8Q3 282 aaKnown RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 DYNLRB2Q8TF09 96 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 FAM46AQ96IP4 442 aaKnown RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ZDHHC5Q9C0B5 715 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 P2RY12Q9H244 342 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 CNTD2Q9H8S5 307 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 CHODLQ9H9P2 273 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PTTG3PQ9NZH4 202 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 WRAP73Q9P2S5 460 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 FBXW11Q9UKB1 542 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 MKLN1Q9UL63 735 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 DIP2BQ9P265 1576 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 IGHV3OR16-12A0A075B7B8 117 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF99A8MXY4 864 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 KDM4EB2RXH2 506 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PRAMEF26H0Y7S4 382 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SLC43A1O75387 559 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PLAUP00749 431 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SOD2P04179 222 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 C7P10643 843 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 F3P13726 295 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 RAB3AP20336 220 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 OMGP23515 440 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ELAVL4P26378 380 aaKnown RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 S100A4P26447 101 aaKnown RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PTGER1P34995 402 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SSR4P51571 173 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 APOFQ13790 326 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 TBC1D28Q2M2D7 210 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.48□□□□□ -1.532e-8■■■■■ 27.8
BRCA1-203ENST00000357654 MOB3BQ86TA1 216 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SULF2Q8IWU5 870 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF679Q8IYX0 411 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 C3orf58Q8NDZ4 430 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 OR2M3Q8NG83 312 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 OR5M9Q8NGP3 310 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 M1APQ8TC57 530 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ROBO4Q8WZ75 1007 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PGAP3Q96FM1 320 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PRRC1Q96M27 445 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 UHRF2Q96PU4 802 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ULBP2Q9BZM5 246 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF576Q9H609 170 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ZDHHC7Q9NXF8 308 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SMPD3Q9NY59 655 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 CLCF1Q9UBD9 225 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 CHRNA9Q9UGM1 479 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 USP3Q9Y6I4 520 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 CEP152O94986 1710 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 BHLHE40O14503 412 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 MARCKSL1P49006 195 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SGSHP51688 502 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 MAP4K2Q12851 820 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SLC14A1Q13336 389 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms