RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 UBQLNLQ8IYU4 475 aa23.19■■□□□ 1.3
HDGF-201ENST00000357325 SLC22A18Q96BI1 424 aa23.19■■□□□ 1.3
HDGF-201ENST00000357325 CLEC1BQ9P126 229 aa23.19■■□□□ 1.3
HDGF-201ENST00000357325 C19orf53Q9UNZ5 99 aaPredicted RBP23.19■■□□□ 1.3
HDGF-201ENST00000357325 SIRT4Q9Y6E7 314 aaPredicted RBP23.19■■□□□ 1.3
HDGF-201ENST00000357325 ATP6V1E1P36543 226 aa23.18■■□□□ 1.3
HDGF-201ENST00000357325 OR1Q1Q15612 314 aa23.18■■□□□ 1.3
HDGF-201ENST00000357325 THSD4Q6ZMP0 1018 aa23.18■■□□□ 1.3
HDGF-201ENST00000357325 FAM181AQ8N9Y4 354 aa23.18■■□□□ 1.3
HDGF-201ENST00000357325 NR4A3Q92570 626 aa23.18■■□□□ 1.3
HDGF-201ENST00000357325 PIGUQ9H490 435 aa23.18■■□□□ 1.3
HDGF-201ENST00000357325 TRIM45Q9H8W5 580 aaPredicted RBP23.18■■□□□ 1.3
HDGF-201ENST00000357325 ZNF223Q9UK11 482 aaPredicted RBP23.18■■□□□ 1.3
HDGF-201ENST00000357325 GON4LQ3T8J9 2241 aa23.18■■□□□ 1.3
HDGF-201ENST00000357325 CASKO14936 926 aa23.18■■□□□ 1.3
HDGF-201ENST00000357325 LYPD3O95274 346 aa23.18■■□□□ 1.3
HDGF-201ENST00000357325 APEX1P27695 318 aaKnown RBP23.18■■□□□ 1.3
HDGF-201ENST00000357325 KRR1Q13601 381 aaKnown RBP23.18■■□□□ 1.3
HDGF-201ENST00000357325 SF3B4Q15427 424 aaKnown RBP eCLIP23.18■■□□□ 1.32e-7■■■□□ 18.8
HDGF-201ENST00000357325 TIMP4Q99727 224 aa23.18■■□□□ 1.3
HDGF-201ENST00000357325 EXOGQ9Y2C4 368 aaKnown RBP23.18■■□□□ 1.3
HDGF-201ENST00000357325 HTR3EA5X5Y0 456 aa23.17■■□□□ 1.3
HDGF-201ENST00000357325 TMCC2O75069 709 aa23.17■■□□□ 1.3
HDGF-201ENST00000357325 HTR1FP30939 366 aa23.17■■□□□ 1.3
HDGF-201ENST00000357325 EOGTQ5NDL2 527 aa23.17■■□□□ 1.3
HDGF-201ENST00000357325 CXXC5Q7LFL8 322 aaKnown RBP23.17■■□□□ 1.3
HDGF-201ENST00000357325 MARCH9Q86YJ5 346 aa23.17■■□□□ 1.3
HDGF-201ENST00000357325 ATP6V1C2Q8NEY4 427 aa23.17■■□□□ 1.3
HDGF-201ENST00000357325 SENP5Q96HI0 755 aaPredicted RBP23.17■■□□□ 1.3
HDGF-201ENST00000357325 ZFYVE21Q9BQ24 234 aa23.17■■□□□ 1.3
HDGF-201ENST00000357325 C11orf54Q9H0W9 315 aaPredicted RBP23.17■■□□□ 1.3
HDGF-201ENST00000357325 NLGN3Q9NZ94 848 aa23.17■■□□□ 1.3
HDGF-201ENST00000357325 PTGFRNQ9P2B2 879 aa23.17■■□□□ 1.3
HDGF-201ENST00000357325 PCDHGB2Q9Y5G2 931 aa23.17■■□□□ 1.3
HDGF-201ENST00000357325 GABRPO00591 440 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 HPGDSO60760 199 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 RFPL3O75679 317 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 IGHA1P01876 353 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 CSF2P04141 144 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 IFI30P13284 250 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 TLX1P31314 330 aaPredicted RBP23.16■■□□□ 1.3
HDGF-201ENST00000357325 RSBN1Q5VWQ0 802 aaPredicted RBP23.16■■□□□ 1.3
HDGF-201ENST00000357325 ZNF619Q8N2I2 560 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 TMEM99Q8N816 258 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 RFKQ969G6 155 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 RIPOR3Q96MK2 946 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 RBCK1Q9BYM8 510 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 SIDT1Q9NXL6 827 aaKnown RBP23.16■■□□□ 1.3
HDGF-201ENST00000357325 CYR61O00622 381 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 ADAM11O75078 769 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 GSTT2P0CG29 244 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 GSTT2BP0CG30 244 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 TBXA2RP21731 343 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 TPMTP51580 245 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 DSG2Q14126 1118 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 P2RY14Q15391 338 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 DEFB110Q30KQ9 67 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 TRIM48Q8IWZ4 208 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 COX18Q8N8Q8 333 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 MED18Q9BUE0 208 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 PRRG3Q9BZD7 231 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 ISYNA1Q9NPH2 558 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 CLDND1Q9NY35 253 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 TNFRSF10DQ9UBN6 386 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 NCKAP1Q9Y2A7 1128 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 SPTBP11277 2137 aa23.16■■□□□ 1.3
HDGF-201ENST00000357325 IRGMA1A4Y4 181 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 UNC119BA6NIH7 251 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 SGK494L7N484 410 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 HOXC4P09017 264 aaPredicted RBP23.15■■□□□ 1.3
HDGF-201ENST00000357325 CLUP10909 449 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 HNRNPA2B1P22626 353 aaKnown RBP23.15■■□□□ 1.3
HDGF-201ENST00000357325 FGF9P31371 208 aaPredicted RBP23.15■■□□□ 1.3
HDGF-201ENST00000357325 IFITM2Q01629 132 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 MGAT2Q10469 447 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 PYDC2Q56P42 97 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 DDI2Q5TDH0 399 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 ZNF517Q6ZMY9 492 aaPredicted RBP23.15■■□□□ 1.3
HDGF-201ENST00000357325 TMEM91Q6ZNR0 172 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 Q6ZSR6 202 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 GLCCI1Q86VQ1 547 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 GATAD2AQ86YP4 633 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 OR13C2Q8NGS9 318 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 OR6F1Q8NGZ6 308 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 FANK1Q8TC84 345 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 TWSG1Q9GZX9 223 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 S1PR5Q9H228 398 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 IL21RQ9HBE5 538 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 MAT2BQ9NZL9 334 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 NDRG2Q9UN36 371 aaKnown RBP23.15■■□□□ 1.3
HDGF-201ENST00000357325 TRDV1A0A1B0GX56 115 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 TRAPPC13A5PLN9 417 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 J3QRE1 110 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 POLR1CO15160 346 aaPredicted RBP23.15■■□□□ 1.3
HDGF-201ENST00000357325 STX11O75558 287 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 REM1O75628 298 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 RPS4Y1P22090 263 aaKnown RBP23.15■■□□□ 1.3
HDGF-201ENST00000357325 GABRA3P34903 492 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 COPZ1P61923 177 aa23.15■■□□□ 1.3
HDGF-201ENST00000357325 PRICKLE4Q2TBC4 344 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms