RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 CDH12P55289 794 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 Q0VFX4 171 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 FGFBP1Q14512 234 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 GANABQ14697 944 aaKnown RBP16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 LAPTM4AQ15012 233 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 COLEC12Q5KU26 742 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 KDM4DQ6B0I6 523 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 FAHD1Q6P587 224 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 APOOLQ6UXV4 268 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 MRGPREQ86SM8 312 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 CHERPQ8IWX8 916 aaKnown RBP16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 IL22RA1Q8N6P7 574 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 ADAMTS17Q8TE56 1095 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 NACC2Q96BF6 587 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 UBQLN4Q9NRR5 601 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 P4HTMQ9NXG6 502 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 MYOTQ9UBF9 498 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 TMEFF2Q9UIK5 374 aaPredicted RBP16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 NTNG1Q9Y2I2 539 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 NPFFR2Q9Y5X5 522 aa16.69■□□□□ 0.26
SMARCD3-202ENST00000356800 HEATR5AQ86XA9 2040 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 FREM2Q5SZK8 3169 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 H0YAE9 185 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 UGT2B11O75310 529 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 GADD45GO95257 159 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 OXSR1O95747 527 aaPredicted RBP16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 PRG2P13727 222 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 IL12BP29460 328 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 LCN1P31025 176 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 PNLIPRP2P54317 469 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 RGS8P57771 180 aaPredicted RBP16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 SMIM11AP58511 58 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 PSPHP78330 225 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 PIN1Q13526 163 aaPredicted RBP16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 RTP5Q14D33 572 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 PDK3Q15120 406 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 MICAQ29983 383 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 SWT1Q5T5J6 900 aaKnown RBP16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 ANKRD34AQ69YU3 496 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 DHRSXQ8N5I4 330 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 NR4A3Q92570 626 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 PSD2Q9BQI7 771 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 HOXD1Q9GZZ0 328 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 EVA1AQ9H8M9 152 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 NMNAT1Q9HAN9 279 aaPredicted RBP16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 DCHS1Q96JQ0 3298 aa16.68■□□□□ 0.26
SMARCD3-202ENST00000356800 DOCK10Q96BY6 2186 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 ARRDC5A6NEK1 342 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 SERINC4A6NH21 518 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 HS6ST1O60243 411 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 HPP00738 406 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 GKN3PP0CG01 181 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 TBXA2RP21731 343 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 KRT20P35900 424 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 CAPGP40121 348 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 DAPP51397 102 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 NRG3P56975 720 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 EXOC3L2Q2M3D2 409 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 FNDC7Q5VTL7 733 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 LYPD8Q6UX82 237 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 GRAMD2AQ8IUY3 354 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 PIK3C3Q8NEB9 887 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 OR52J3Q8NH60 311 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 GIPC3Q8TF64 312 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 ARSGQ96EG1 525 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 PRRC1Q96M27 445 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 ARMC7Q9H6L4 198 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 CTPS2Q9NRF8 586 aa16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 DNAJB12Q9NXW2 375 aaKnown RBP16.67■□□□□ 0.26
SMARCD3-202ENST00000356800 A0A1W2PRQ8 180 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 OR6C70A6NIJ9 312 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 ADAM11O75078 769 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 PPM1BO75688 479 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 OR2J2O76002 312 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 ITGAMP11215 1152 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 IGFBP5P24593 272 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 RAD23AP54725 363 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 ADARB1P78563 741 aaKnown RBP16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 DGCR6Q14129 220 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 CD226Q15762 336 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 NDUFAF6Q330K2 333 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 TAGAPQ8N103 731 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 OIT3Q8WWZ8 545 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 GATA6Q92908 595 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 CNBD2Q96M20 576 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 RTN4RQ9BZR6 473 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 GPN2Q9H9Y4 310 aaPredicted RBP16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 ZBTB20Q9HC78 741 aaPredicted RBP16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 ORC6Q9Y5N6 252 aa16.66■□□□□ 0.26
SMARCD3-202ENST00000356800 MAN1A2O60476 641 aa16.65■□□□□ 0.26
SMARCD3-202ENST00000356800 H1F0P07305 194 aaKnown RBP16.65■□□□□ 0.26
SMARCD3-202ENST00000356800 LIPCP11150 499 aa16.65■□□□□ 0.26
SMARCD3-202ENST00000356800 ATP1A4Q13733 1029 aa16.65■□□□□ 0.26
SMARCD3-202ENST00000356800 ZSWIM7Q19AV6 140 aa16.65■□□□□ 0.26
SMARCD3-202ENST00000356800 RAB43Q86YS6 212 aa16.65■□□□□ 0.26
SMARCD3-202ENST00000356800 CMIPQ8IY22 773 aa16.65■□□□□ 0.26
SMARCD3-202ENST00000356800 ATG16L2Q8NAA4 619 aa16.65■□□□□ 0.26
SMARCD3-202ENST00000356800 GATSQ8NAP1 163 aa16.65■□□□□ 0.26
SMARCD3-202ENST00000356800 ZNF527Q8NB42 609 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms