RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 TOR4AQ9NXH8 423 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 MED13Q9UHV7 2174 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 A0A0G2JPF8 293 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 AGAP5A6NIR3 686 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 HNRNPCL2B2RXH8 293 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 HNRNPCL3B7ZW38 293 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 H7C1C5 153 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 MAGEB3O15480 346 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 CNOT3O75175 753 aaKnown RBP12.81□□□□□ -0.36
LSS-201ENST00000356396 HNRNPCL4P0DMR1 293 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 NOS3P29474 1203 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 LCN6P62502 163 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 MARCH3Q86UD3 253 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 DTX3Q8N9I9 347 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 OR4Q3Q8NH05 313 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 WDR36Q8NI36 951 aaKnown RBP12.81□□□□□ -0.36
LSS-201ENST00000356396 SAP25Q8TEE9 199 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 HDAC2Q92769 488 aaKnown RBP12.81□□□□□ -0.36
LSS-201ENST00000356396 CCDC74BQ96LY2 380 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 EXOSC4Q9NPD3 245 aaKnown RBP12.81□□□□□ -0.36
LSS-201ENST00000356396 MEPEQ9NQ76 525 aaPredicted RBP12.81□□□□□ -0.36
LSS-201ENST00000356396 HRH3Q9Y5N1 445 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 RALGAPA1Q6GYQ0 2036 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 ADGRG4Q8IZF6 3080 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 TMEM265A0A087WTH1 108 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 CLDN4O14493 209 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 ITPKBP27987 946 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 IRAK1BP1Q5VVH5 260 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 HTRA1Q92743 480 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 TRNT1Q96Q11 434 aaKnown RBP12.81□□□□□ -0.36
LSS-201ENST00000356396 TMEM185BQ9H7F4 350 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 LANCL2Q9NS86 450 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 POFUT2Q9Y2G5 429 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 RGS10O43665 173 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 PDE9AO76083 593 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 GPANK1O95872 356 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 ANXA8P13928 327 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 CRYZQ08257 329 aaKnown RBP12.8□□□□□ -0.36
LSS-201ENST00000356396 MLC1Q15049 377 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 KIRREL2Q6UWL6 708 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 UTS2BQ765I0 119 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 C10orf53Q8N6V4 93 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 BCORP1Q8N888 145 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 RHOXF1Q8NHV9 184 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 IFI44Q8TCB0 444 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 STT3BQ8TCJ2 826 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 RORBQ92753 470 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 TSSK2Q96PF2 358 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.8□□□□□ -0.36
LSS-201ENST00000356396 SAP130Q9H0E3 1048 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 ZNF304Q9HCX3 659 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 IGHV5-10-1A0A0J9YXX1 117 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 NUDT21O43809 227 aaKnown RBP12.8□□□□□ -0.36
LSS-201ENST00000356396 TBX19O60806 448 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 SLC35E2P0CK97 266 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 GPR3P46089 330 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 GRM7Q14831 915 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 CEBPEQ15744 281 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 PROX2Q3B8N5 592 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 ZBED5Q49AG3 693 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 B3GNT6Q6ZMB0 384 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 PLXDC1Q8IUK5 500 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 CEP76Q8TAP6 659 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 ZNF501Q96CX3 271 aaPredicted RBP12.8□□□□□ -0.36
LSS-201ENST00000356396 LYRM4Q9HD34 91 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 ACOT13Q9NPJ3 140 aa12.8□□□□□ -0.36
LSS-201ENST00000356396 CTNSO60931 367 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 ICOSLGO75144 302 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 NSA2O95478 260 aaKnown RBP12.79□□□□□ -0.36
LSS-201ENST00000356396 ITGAMP11215 1152 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 CAV3P56539 151 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 FXYD6P3P58550 94 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 LARS2Q15031 903 aaKnown RBP12.79□□□□□ -0.36
LSS-201ENST00000356396 ARHGAP11BQ3KRB8 267 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 GTF2IRD2BQ6EKJ0 949 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 CASP12Q6UXS9 341 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 GTF2IRD2Q86UP8 949 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 ZNF619Q8N2I2 560 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 CDRT4Q8N9R6 151 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 SLC2A12Q8TD20 617 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 CTHRC1Q96CG8 243 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 PRRC1Q96M27 445 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 VSTM2LQ96N03 204 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 MTHFD2LQ9H903 347 aaPredicted RBP12.79□□□□□ -0.36
LSS-201ENST00000356396 KLHL1Q9NR64 748 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 SCN3BQ9NY72 215 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 KCND3Q9UK17 655 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 ZNF232Q9UNY5 417 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 A0A087WV48 116 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 SRPX2O60687 465 aaPredicted RBP12.79□□□□□ -0.36
LSS-201ENST00000356396 SCRG1O75711 98 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 PLGP00747 810 aaPredicted RBP12.79□□□□□ -0.36
LSS-201ENST00000356396 DBTP11182 482 aaKnown RBP12.79□□□□□ -0.36
LSS-201ENST00000356396 HPGDP15428 266 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 CD36P16671 472 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 FBLP22087 321 aaKnown RBP12.79□□□□□ -0.36
LSS-201ENST00000356396 GADD45AP24522 165 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 GIPRP48546 466 aa12.79□□□□□ -0.36
LSS-201ENST00000356396 EEF1A1P68104 462 aaKnown RBP12.79□□□□□ -0.36
LSS-201ENST00000356396 OGFOD3Q6PK18 319 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms