RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 EIF1P41567 113 aaKnown RBP9.57□□□□□ -0.88
CAPN3-204ENST00000356316 RAC1P63000 192 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 POU6F2P78424 691 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-204ENST00000356316 SLC18A2Q05940 514 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.57□□□□□ -0.88
CAPN3-204ENST00000356316 KANK2Q63ZY3 851 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 ANKRD34AQ69YU3 496 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 BLOC1S3Q6QNY0 202 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 RNF165Q6ZSG1 346 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 ESPNLQ6ZVH7 1005 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 ZNF550Q7Z398 422 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 GGNQ86UU5 652 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 LRRC75A-AS1Q8N1F1 130 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 NATD1Q8N6N6 113 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 GATSQ8NAP1 163 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 ZNF527Q8NB42 609 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 OR6K3Q8NGY3 331 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 OR2T11Q8NH01 316 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 B4GALNT2Q8NHY0 566 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 FBXO30Q8TB52 745 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 FAM110BQ8TC76 370 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 CAVIN3Q969G5 261 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 C16orf58Q96GQ5 468 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 SH3YL1Q96HL8 342 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-204ENST00000356316 GMPPAQ96IJ6 420 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-204ENST00000356316 PPP3R2Q96LZ3 170 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 CCL19Q99731 98 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 BTBD2Q9BX70 525 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 HOXD1Q9GZZ0 328 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 TIGARQ9NQ88 270 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 DLL4Q9NR61 685 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 ZCCHC3Q9NUD5 404 aaKnown RBP9.57□□□□□ -0.88
CAPN3-204ENST00000356316 ATAD3AQ9NVI7 634 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 NTMQ9P121 344 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 DNAJC15Q9Y5T4 150 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 PTGDR2Q9Y5Y4 395 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 ABCA4P78363 2273 aa9.57□□□□□ -0.88
CAPN3-204ENST00000356316 GTPBP1O00178 669 aaKnown RBP9.56□□□□□ -0.88
CAPN3-204ENST00000356316 LSM1O15116 133 aaKnown RBP9.56□□□□□ -0.88
CAPN3-204ENST00000356316 NPHS1O60500 1241 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 PEX11AO75192 247 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 AQP8O94778 261 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 OPN1LWP04000 364 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 KRT16P08779 473 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 ACP2P11117 423 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 BCKDHAP12694 445 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 HOXB4P17483 251 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-204ENST00000356316 MAP3K8P41279 467 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 FRKP42685 505 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-204ENST00000356316 CARD18P57730 90 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 IFFO1Q0D2I5 559 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 TP53BP2Q13625 1128 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 PCLAFQ15004 111 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 MLC1Q15049 377 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 DUSP5Q16690 384 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 TMEM44Q2T9K0 475 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 LSM12Q3MHD2 195 aaKnown RBP9.56□□□□□ -0.88
CAPN3-204ENST00000356316 SPDYE7PQ495Y7 208 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 ATP6AP1LQ52LC2 224 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 ZNF385BQ569K4 471 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 HBMQ6B0K9 141 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 MFSD12Q6NUT3 480 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 CLEC9AQ6UXN8 241 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 C20orf204Q6ZNR8 217 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 BEND4Q6ZU67 534 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 LILRA2Q8N149 483 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 GTPBP8Q8N3Z3 284 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-204ENST00000356316 OR10D3Q8NH80 312 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 OR2V1Q8NHB1 315 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 PHOSPHO1Q8TCT1 267 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 AGR3Q8TD06 166 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 ADAMTS15Q8TE58 950 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 TWIST2Q8WVJ9 160 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 HOXB13Q92826 284 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-204ENST00000356316 FCRL1Q96LA6 429 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 RNF145Q96MT1 663 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 STACQ99469 402 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 TUBB1Q9H4B7 451 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 MED17Q9NVC6 651 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 CLEC4AQ9UMR7 237 aa9.56□□□□□ -0.88
CAPN3-204ENST00000356316 FAF1Q9UNN5 650 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-204ENST00000356316 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 A0A1W2PPR1 153 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 A0A1W2PQD3 144 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 C7orf72A4D263 438 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 GJE1A6NN92 205 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 DEFB108AA8MXU0 73 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 TNFSF11O14788 317 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 PIP5K1BO14986 540 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 ADAMDEC1O15204 470 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 CFLARO15519 480 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 CXCL13O43927 109 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 SS18L1O75177 396 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-204ENST00000356316 HMGN2P05204 90 aaKnown RBP9.55□□□□□ -0.88
CAPN3-204ENST00000356316 IL11P20809 199 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 EFNA1P20827 205 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-204ENST00000356316 ALDH3A1P30838 453 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 SLC6A8P48029 635 aa9.55□□□□□ -0.88
CAPN3-204ENST00000356316 CCT3P49368 545 aaKnown RBP9.55□□□□□ -0.88
CAPN3-204ENST00000356316 LTBQ06643 244 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms