RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 FUT4P22083 530 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 ADH7P40394 386 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 LIMS1P48059 325 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 ZNF136P52737 540 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 SMIM11AP58511 58 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 TAS2R41P59536 307 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 IL10RAQ13651 578 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 RSPO4Q2I0M5 234 aaPredicted RBP14.34□□□□□ -0.11
CTSA-202ENST00000354880 DESI1Q6ICB0 168 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 RANBP3LQ86VV4 465 aaPredicted RBP14.34□□□□□ -0.11
CTSA-202ENST00000354880 PIK3C3Q8NEB9 887 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 PRR14Q9BWN1 585 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 ZBTB20Q9HC78 741 aaPredicted RBP14.34□□□□□ -0.11
CTSA-202ENST00000354880 CTPS2Q9NRF8 586 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 P4HTMQ9NXG6 502 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 DNAJB12Q9NXW2 375 aaKnown RBP14.34□□□□□ -0.11
CTSA-202ENST00000354880 USE1Q9NZ43 259 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 SLC35A3Q9Y2D2 325 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 MRPS18BQ9Y676 258 aaKnown RBP14.34□□□□□ -0.11
CTSA-202ENST00000354880 CPSF4LA6NMK7 179 aaKnown RBP14.34□□□□□ -0.11
CTSA-202ENST00000354880 ZNF354AO60765 605 aaPredicted RBP14.34□□□□□ -0.11
CTSA-202ENST00000354880 UGT2B11O75310 529 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 PPM1BO75688 479 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 DXOO77932 396 aaKnown RBP14.34□□□□□ -0.11
CTSA-202ENST00000354880 NADKO95544 446 aaPredicted RBP14.34□□□□□ -0.11
CTSA-202ENST00000354880 HPP00738 406 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 CSTAP01040 98 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 NGFRP08138 427 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 ICAM2P13598 275 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 PRG2P13727 222 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 IFNA8P32881 189 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 FOXD4Q12950 439 aaPredicted RBP14.34□□□□□ -0.11
CTSA-202ENST00000354880 FGD3Q5JSP0 725 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 ENTPD8Q5MY95 495 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 PLEKHM3Q6ZWE6 761 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 RAB43Q86YS6 212 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 OFCC1Q8IZS5 231 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 ADAMTS16Q8TE57 1224 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 GIPC3Q8TF64 312 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 SLC35B4Q969S0 331 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 ALPK1Q96QP1 1244 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 SMPD3Q9NY59 655 aaPredicted RBP14.34□□□□□ -0.11
CTSA-202ENST00000354880 TESQ9UGI8 421 aaKnown RBP14.34□□□□□ -0.11
CTSA-202ENST00000354880 FBXL4Q9UKA2 621 aa14.34□□□□□ -0.11
CTSA-202ENST00000354880 A0A1W2PRQ8 180 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 DLGAP1O14490 977 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 FMO6PO60774 539 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 OR2J2O76002 312 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 UBTFL6P0CB48 400 aaPredicted RBP14.33□□□□□ -0.12
CTSA-202ENST00000354880 ACADSP16219 412 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 NAGAP17050 411 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 ELAVL4P26378 380 aaKnown RBP14.33□□□□□ -0.12
CTSA-202ENST00000354880 TMED10P49755 219 aaKnown RBP14.33□□□□□ -0.12
CTSA-202ENST00000354880 DGCR6Q14129 220 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 EFR3AQ14156 821 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 MICAQ29983 383 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 APOOLQ6UXV4 268 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 MRGPREQ86SM8 312 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 SLC22A8Q8TCC7 542 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 OSBPL11Q9BXB4 747 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 POLR2J2Q9GZM3 115 aaKnown RBP14.33□□□□□ -0.12
CTSA-202ENST00000354880 POLR2J3Q9H1A7 115 aaKnown RBP14.33□□□□□ -0.12
CTSA-202ENST00000354880 IL17BQ9UHF5 180 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 TMCC3Q9ULS5 477 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 RAB26Q9ULW5 256 aa14.33□□□□□ -0.12
CTSA-202ENST00000354880 EXPH5Q8NEV8 1989 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 TRBV4-1A0A0J9YWV2 114 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 H3BNH8 94 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 OR5F1O95221 314 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 UQCRBP14927 111 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 ST3GAL3Q11203 375 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 CAMK2BQ13554 666 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 CD226Q15762 336 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 DCST1Q5T197 706 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 FNDC7Q5VTL7 733 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 ANKRD34AQ69YU3 496 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 ZNF550Q7Z398 422 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 ATG16L2Q8NAA4 619 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 GATSQ8NAP1 163 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 OR10G2Q8NGC3 310 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 PHOSPHO1Q8TCT1 267 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 KIAA1143Q96AT1 154 aaPredicted RBP14.32□□□□□ -0.12
CTSA-202ENST00000354880 RDH12Q96NR8 316 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 GPN2Q9H9Y4 310 aaPredicted RBP14.32□□□□□ -0.12
CTSA-202ENST00000354880 MAN2C1Q9NTJ4 1040 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 KIF17Q9P2E2 1029 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 NTNG1Q9Y2I2 539 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 AP4B1Q9Y6B7 739 aa14.32□□□□□ -0.12
CTSA-202ENST00000354880 A0A1W2PQD3 144 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 DCDC2BA2VCK2 349 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 ALG1L2C9J202 215 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 CYP7B1O75881 506 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 CCNB2O95067 398 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 LIPCP11150 499 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 HTR2AP28223 471 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 EVI2BP34910 448 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 DAPP51397 102 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 FBXW4P57775 412 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 TGIF1Q15583 401 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 NHSL2Q5HYW2 709 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms