RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 TMEM31Q5JXX7 168 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 ARMC4Q5T2S8 1044 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 CPOQ8IVL8 374 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 TMEM52Q8NDY8 209 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 ITFG2Q969R8 447 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 SECISBP2Q96T21 854 aaKnown RBP20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 ZNF649Q9BS31 505 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 RERGLQ9H628 205 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 HINT3Q9NQE9 182 aaKnown RBP20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 YARS2Q9Y2Z4 477 aaKnown RBP20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 H3BQ06 376 aaPredicted RBP20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 GKN3PP0CG01 181 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 SLC35E2P0CK97 266 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 PRG2P13727 222 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 GALP22466 123 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 ZNF155Q12901 538 aaPredicted RBP20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 COL9A2Q14055 689 aaPredicted RBP20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 GLYR1Q49A26 553 aaPredicted RBP20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 ZNF613Q6PF04 617 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 TMPRSS11FQ6ZWK6 438 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 OR5T3Q8NGG3 340 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 FANK1Q8TC84 345 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 SLC37A2Q8TED4 501 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 ZNF559Q9BR84 538 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 DPH1Q9BZG8 443 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 ASB6Q9NWX5 421 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 NPAP1Q9NZP6 1156 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 CD207Q9UJ71 328 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 KCNE5Q9UJ90 142 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 TBC1D24Q9ULP9 559 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 GRIP1Q9Y3R0 1128 aa20.66■□□□□ 0.9
NKX2-1-201ENST00000354822 REV3LO60673 3130 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 ARHGEF17Q96PE2 2063 aaPredicted RBP20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 PEX12O00623 359 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 COQ9O75208 318 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 NKX2-2O95096 273 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 GUSBP08236 651 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 CLEC2LP0C7M8 214 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 PAICSP22234 425 aaKnown RBP20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 CCR5P51681 352 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 VSX2P58304 361 aaPredicted RBP20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 BDH1Q02338 343 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 TFF2Q03403 129 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 SCN1BQ07699 218 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 GPR50Q13585 617 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 ZNF79Q15937 498 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 SLC22A18ASQ8N1D0 253 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 GDPD1Q8N9F7 314 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 KIAA1143Q96AT1 154 aaPredicted RBP20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 TMEM27Q9HBJ8 222 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 IL20RAQ9UHF4 553 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 FABP12A6NFH5 140 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 J3QRE1 110 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 LYPD3O95274 346 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 SLC2A10O95528 541 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 ZGLP1P0C6A0 271 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 IFI30P13284 250 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 TGM4P49221 684 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 COL19A1Q14993 1142 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 ARMC6Q6NXE6 501 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 FAM131AQ6UXB0 335 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 MEPCEQ7L2J0 689 aaKnown RBP20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 TAF8Q7Z7C8 310 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 TDHQ8IZJ6 230 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 LNX2Q8N448 690 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 SLC44A3Q8N4M1 653 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 BBS1Q8NFJ9 593 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 IL17RDQ8NFM7 739 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 HOXB13Q92826 284 aaPredicted RBP20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 ANKRD9Q96BM1 317 aaPredicted RBP20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 ABHD8Q96I13 439 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 INIPQ9NRY2 104 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 FBXO34Q9NWN3 711 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 USP36Q9P275 1121 aaKnown RBP20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 MED31Q9Y3C7 131 aa20.65■□□□□ 0.9
NKX2-1-201ENST00000354822 FAM86C2PA6NEL3 165 aa20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 OR5K3A6NET4 321 aa20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 TMEM221A6NGB7 291 aa20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 C2CD4DB7Z1M9 353 aa20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 BHLHE40O14503 412 aa20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 ATP6V1G1O75348 118 aa20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 DRD5P21918 477 aa20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 RNF144AP50876 292 aaPredicted RBP20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 EXOSC7Q15024 291 aaKnown RBP20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 FIGNL1Q6PIW4 674 aa20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 ARIH2OSQ8N7S6 290 aa20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 EFHD2Q96C19 240 aaPredicted RBP20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 DIRAS2Q96HU8 199 aa20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 MIXL1Q9H2W2 232 aa20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 POLHQ9Y253 713 aa20.64■□□□□ 0.89
NKX2-1-201ENST00000354822 DYRK3O43781 588 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 IL7P13232 177 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 MAKP20794 623 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 BMP8BP34820 402 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 AMZ1Q400G9 498 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 ZNF322Q6U7Q0 402 aaPredicted RBP20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 WDR88Q6ZMY6 472 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 BMP8AQ7Z5Y6 402 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 ACBD7Q8N6N7 88 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 DOK4Q8TEW6 326 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms