RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 DUSP2Q05923 314 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 GGTLC2Q14390 218 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 OR1C1Q15619 314 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 ANKRD34AQ69YU3 496 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 PDZD3Q86UT5 571 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 ZNF695Q8IW36 515 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 WDSUB1Q8N9V3 476 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 LSM14AQ8ND56 463 aaKnown RBP4.83□□□□□ -1.64
CKAP5-202ENST00000354558 OR10G2Q8NGC3 310 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 PIWIL2Q8TC59 973 aaKnown RBP4.83□□□□□ -1.64
CKAP5-202ENST00000354558 FGF11Q92914 225 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 MS4A4AQ96JQ5 239 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 CCDC106Q9BWC9 280 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 BOCQ9BWV1 1114 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 SEMA6CQ9H3T2 930 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 SERTAD4Q9NUC0 356 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 HCSTQ9UBK5 93 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 SH2B3Q9UQQ2 575 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 KCTD3Q9Y597 815 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 NPTNQ9Y639 398 aa4.83□□□□□ -1.64
CKAP5-202ENST00000354558 PIGBOS1A0A0B4J2F0 54 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 A8MVM7 634 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 PLOD2O00469 737 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 SSX5O60225 188 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 P2RX1P51575 399 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 JAM2P57087 298 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 FOLH1Q04609 750 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 RPE65Q16518 533 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 FAM69AQ5T7M9 428 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 OR2A2Q6IF42 318 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 FUKQ8N0W3 1084 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 LINC00471Q8N535 108 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 OR4F6Q8NGB9 312 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 OR10AD1Q8NGE0 317 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 OR4D6Q8NGJ1 314 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 ASB5Q8WWX0 329 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 PIK3IP1Q96FE7 263 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 DIRAS2Q96HU8 199 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 FAM46AQ96IP4 442 aaKnown RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 SNX18Q96RF0 628 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 MBOAT4Q96T53 435 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 TIMM29Q9BSF4 260 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 BTBD10Q9BSF8 475 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 IKZF4Q9H2S9 585 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 KAT8Q9H7Z6 458 aaKnown RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 FN3KRPQ9HA64 309 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 ACSS1Q9NUB1 689 aaPredicted RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 RHCGQ9UBD6 479 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 SLC23A2Q9UGH3 650 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 CDH22Q9UJ99 828 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 SSUH2Q9Y2M2 353 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 HIF3AQ9Y2N7 669 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 PCDHGB6Q9Y5F9 930 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 PRAMEF33A0A0G2JMD5 474 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 CLIC1O00299 241 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 C2P06681 752 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 PSMA1P25786 263 aaKnown RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 RBM34P42696 430 aaKnown RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 ATP1B3P54709 279 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 GDF10P55107 478 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 TXNRD3NBQ6F5E7 133 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 ZNF773Q6PK81 442 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 ADGRD1Q6QNK2 874 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 PLXDC2Q6UX71 529 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 TRABD2AQ86V40 505 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 OR11G2Q8NGC1 345 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 OR1S1Q8NH92 325 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 FUBP1Q96AE4 644 aaKnown RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 UBL7Q96S82 380 aaPredicted RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 KCNK17Q96T54 332 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 NRSN2Q9GZP1 204 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 RNF38Q9H0F5 515 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 PLEKHJ1Q9NW61 149 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 TMEM131LA2VDJ0 1609 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 COL16A1Q07092 1604 aaPredicted RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 SUSD5O60279 629 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 MLLT6P55198 1093 aaPredicted RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 TAS2R38P59533 333 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 SEC61A1P61619 476 aaKnown RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 AIMP2Q13155 320 aaKnown RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 GALEQ14376 348 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 LRRC10Q5BKY1 277 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 ACSBG2Q5FVE4 666 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 NXNL2Q5VZ03 156 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 RGS7BPQ6MZT1 257 aaPredicted RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 ANKRD16Q6P6B7 361 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 BAIAP2L2Q6UXY1 529 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 PLEKHG7Q6ZR37 379 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 HTR3DQ70Z44 454 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 UBE2Q1Q7Z7E8 422 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 MOB3BQ86TA1 216 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 PLPP6Q8IY26 295 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 OR51A7Q8NH64 312 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 HSD17B8Q92506 261 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 FAM46BQ96A09 425 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 RTP4Q96DX8 246 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 ZNF582Q96NG8 517 aaPredicted RBP4.82□□□□□ -1.64
CKAP5-202ENST00000354558 PIMREGQ9BSJ6 248 aa4.82□□□□□ -1.64
CKAP5-202ENST00000354558 TMEM109Q9BVC6 243 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms