RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 ZNF439Q8NDP4 499 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 ADAM7Q9H2U9 754 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 VSX1Q9NZR4 365 aaPredicted RBP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 BTNL2Q9UIR0 455 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 DHPSP49366 369 aaPredicted RBP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 GLO1Q04760 184 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 SLC14A2Q15849 920 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 SLC38A6Q8IZM9 456 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 OR14L1PQ8NHC6 308 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 TMEM163Q8TC26 289 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 SFXN2Q96NB2 322 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 TMEM175Q9BSA9 504 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 ATG10Q9H0Y0 220 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 GABARAPH6UMI1 98 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 DLK1P80370 383 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 MGAT3Q09327 533 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 SNTB1Q13884 538 aaKnown RBP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 PTRH1Q86Y79 214 aaKnown RBP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 M0R3H8 397 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 ZNF44P15621 663 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 PRKACGP22612 351 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 CAMK2BQ13554 666 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 BRICD5Q6PL45 260 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 CMBLQ96DG6 245 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 OSMRQ99650 979 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 SLC22A14Q9Y267 594 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 V9GY05 133 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 LAMB4A4D0S4 1761 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 RNASET2O00584 256 aaKnown RBP11.93□□□□□ -0.5
COL6A3-203ENST00000353578 EDNRBP24530 442 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 CDH26Q8IXH8 852 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 STPG2Q8N412 459 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 ZNF610Q8N9Z0 462 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 HERVK_113Q902F9 699 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 BPIFA2Q96DR5 249 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 MAN2C1Q9NTJ4 1040 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 FBXW2Q9UKT8 454 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 TTC24A2A3L6 582 aaPredicted RBP11.93□□□□□ -0.5
COL6A3-203ENST00000353578 NME4O00746 187 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 MAXP61244 160 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 TRIM61Q5EBN2 209 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 GLIS3Q8NEA6 775 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 TMIGD2Q96BF3 282 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 MCHR1Q99705 422 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 ZNF280AP59817 542 aaPredicted RBP11.93□□□□□ -0.5
COL6A3-203ENST00000353578 PAN2Q504Q3 1202 aaKnown RBP11.93□□□□□ -0.5
COL6A3-203ENST00000353578 CPZQ66K79 652 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 ANKRD16Q6P6B7 361 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 CLEC9AQ6UXN8 241 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 AMZ2Q86W34 360 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 MTMR11A4FU01 709 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 E5RGE8 158 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 HAS3O00219 553 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 SOX18P35713 384 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 CHADLQ6NUI6 762 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 DTWD1Q8N5C7 304 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 TMEM125Q96AQ2 219 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 MIB2Q96AX9 1013 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 AK6Q9Y3D8 172 aaKnown RBP11.93□□□□□ -0.5
COL6A3-203ENST00000353578 BCL9LQ86UU0 1499 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 SCAMP2O15127 329 aaKnown RBP11.93□□□□□ -0.5
COL6A3-203ENST00000353578 OLFM2O95897 454 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 NIFKQ9BYG3 293 aaKnown RBP11.93□□□□□ -0.5
COL6A3-203ENST00000353578 CLN5O75503 358 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 APBA3O96018 575 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 UBL4AP11441 157 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 ERVK-16P61578 105 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 SELENOWP63302 87 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 AANATQ16613 207 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 C12orf29Q8N999 325 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 LCN9Q8WX39 176 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 HRASLS5Q96KN8 279 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 TM6SF2Q9BZW4 377 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 FAM155AB1AL88 458 aaPredicted RBP11.93□□□□□ -0.5
COL6A3-203ENST00000353578 AGPAT2O15120 278 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 BDKRB1P46663 353 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 MZT1Q08AG7 82 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 GPR155Q7Z3F1 870 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 VRK3Q8IV63 474 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 OR5M3Q8NGP4 307 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 LINC01599Q8WXQ3 324 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 SLAMF9Q96A28 289 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 PRDM9Q9NQV7 894 aa11.93□□□□□ -0.5
COL6A3-203ENST00000353578 TRABD2BA6NFA1 517 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 SDHBP21912 280 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 AK4P27144 223 aaPredicted RBP11.92□□□□□ -0.5
COL6A3-203ENST00000353578 CCR9P51686 369 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 OR52N2Q8NGI0 321 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 GRHL3Q8TE85 626 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 A8MVM7 634 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 OR2T1O43869 369 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 AHSGP02765 367 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 KITLGP21583 273 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 C19orf57Q0VDD7 668 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 LILRB1Q8NHL6 650 aaPredicted RBP11.92□□□□□ -0.5
COL6A3-203ENST00000353578 NOX1Q9Y5S8 564 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 TRAV18A0A075B6X5 111 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 GJB1P08034 283 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 MMP2P08253 660 aa11.92□□□□□ -0.5
COL6A3-203ENST00000353578 CD63P08962 238 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms