RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 B3GNT7Q8NFL0 401 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 OR4N2Q8NGD1 307 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 OR8D4Q8NGM9 314 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 C16orf52Q8NHV5 167 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 WDR36Q8NI36 951 aaKnown RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 PTPMT1Q8WUK0 201 aaPredicted RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 CNOT9Q92600 299 aaKnown RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 CCDC74AQ96AQ1 378 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 CRELD1Q96HD1 420 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ZC3H10Q96K80 434 aaKnown RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 Q96MT0 163 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 NUDT22Q9BRQ3 303 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF426Q9BUY5 554 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 PLA2G12AQ9BZM1 189 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 OR10A5Q9H207 317 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ARMC7Q9H6L4 198 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 Q9N2J8 555 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 AMBNQ9NP70 447 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 TIMMDC1Q9NPL8 285 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 C14orf105Q9NVL8 296 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 MRPS18AQ9NVS2 196 aaKnown RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 DNAJB12Q9NXW2 375 aaKnown RBP6.4□□□□□ -1.38
TRIM55-203ENST00000350034 GPR83Q9NYM4 423 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 IL20Q9NYY1 176 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 SELENONQ9NZV5 590 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 PRODH2Q9UF12 536 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 SERTAD3Q9UJW9 196 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 SLC7A7Q9UM01 511 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 ERVK-19Q9WJR5 959 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 DTX4Q9Y2E6 619 aa6.4□□□□□ -1.38
TRIM55-203ENST00000350034 GVINP1Q7Z2Y8 2422 aa6.4□□□□□ -1.39
TRIM55-203ENST00000350034 EML5Q05BV3 1969 aa6.4□□□□□ -1.39
TRIM55-203ENST00000350034 TDRD6O60522 2096 aaKnown RBP6.39□□□□□ -1.39
TRIM55-203ENST00000350034 IGLV3-12A0A075B6K2 115 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 A0A0B4J2E0 115 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 A0A1B0GX12 115 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 A0A1B0GX78 115 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 A0A1W2PQM1 296 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 TCRBV16S1A1N1A0A5B0 115 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 H3BN98 237 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 PRKYO43930 277 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 PIP5K1CO60331 668 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 NOL3O60936 208 aaKnown RBP6.39□□□□□ -1.39
TRIM55-203ENST00000350034 ADAM11O75078 769 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 DDAH2O95865 285 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 GKN3PP0CG01 181 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 ADORA3P0DMS8 318 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 CDK4P11802 303 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 LCN1P31025 176 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 HOXD12P35452 270 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 ADH7P40394 386 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 PPICP45877 212 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 OR1D4P47884 311 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 ARL4DP49703 201 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 SMSP52788 366 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 EFNA3P52797 238 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 LIMK1P53667 647 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 CTBP2P56545 445 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 SLC37A1P57057 533 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 PRKCDQ05655 676 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 NCF4Q15080 339 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 HLA-BQ31612 363 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 FLYWCH1Q4VC44 716 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 SYT14P1Q58G82 188 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 PERM1Q5SV97 790 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 PDZK1Q5T2W1 519 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
TRIM55-203ENST00000350034 PRAMEF17Q5VTA0 474 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 FNDC7Q5VTL7 733 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 SLC27A4Q6P1M0 643 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 ZC3H14Q6PJT7 736 aaKnown RBP6.39□□□□□ -1.39
TRIM55-203ENST00000350034 C19orf48Q6RUI8 117 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 CASP12Q6UXS9 341 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 LINC00114Q6XXX2 140 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF620Q6ZNG0 422 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF367Q7RTV3 350 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 SLC46A3Q7Z3Q1 461 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 TMPRSS9Q7Z410 1059 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 GATAD2AQ86YP4 633 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 TMEM151BQ8IW70 566 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 NRMQ8IXM6 262 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 IQCF1Q8N6M8 205 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 BCORP1Q8N888 145 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 TCEANCQ8N8B7 351 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 LSMEM1Q8N8F7 131 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 PLPP5Q8NEB5 264 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 OR4Q3Q8NH05 313 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 BRIX1Q8TDN6 353 aaKnown RBP6.39□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF721Q8TF20 911 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 TMEM255BQ8WV15 326 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 EDAQ92838 391 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 SENP5Q96HI0 755 aaPredicted RBP6.39□□□□□ -1.39
TRIM55-203ENST00000350034 FAM46AQ96IP4 442 aaKnown RBP6.39□□□□□ -1.39
TRIM55-203ENST00000350034 HS6ST2Q96MM7 605 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF582Q96NG8 517 aaPredicted RBP6.39□□□□□ -1.39
TRIM55-203ENST00000350034 PTCHD1Q96NR3 888 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 SLC46A1Q96NT5 459 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 IL4I1Q96RQ9 567 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms