RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 GBAP04062 536 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 SGCAQ16586 387 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 TMEM175Q9BSA9 504 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 DPM1O60762 260 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 CNR2P34972 360 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 PIGFQ07326 219 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 MED17Q9NVC6 651 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 PPP1R11O60927 126 aaPredicted RBP18.33■□□□□ 0.52
HDAC4-201ENST00000345617 NDUFB2O95178 105 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 SELENOWP63302 87 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 SIAH1Q8IUQ4 282 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 OR5H6Q8NGV6 325 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 OR11A1Q9GZK7 315 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 TESQ9UGI8 421 aaKnown RBP18.33■□□□□ 0.52
HDAC4-201ENST00000345617 SLC2A6Q9UGQ3 507 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 GLOD5A6NK44 160 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 SEC13P55735 322 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 TRAPPC6BQ86SZ2 158 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 SERPINA12Q8IW75 414 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 TSTD1Q8NFU3 115 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 GIMAP1Q8WWP7 306 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 TAS2R16Q9NYV7 291 aa18.33■□□□□ 0.52
HDAC4-201ENST00000345617 MTMR11A4FU01 709 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 B4GALT2O60909 372 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 RAB6AP20340 208 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 MIB2Q96AX9 1013 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 REV1Q9UBZ9 1251 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 ZNF223Q9UK11 482 aaPredicted RBP18.32■□□□□ 0.52
HDAC4-201ENST00000345617 TSPAN6O43657 245 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 KCNE1P15382 129 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 FDXRP22570 491 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 LRRC73Q5JTD7 316 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 FAM182AQ5T1J6 154 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 TMEM107Q6UX40 140 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 OR5T1Q8NG75 326 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 OR5M3Q8NGP4 307 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 CERS4Q9HA82 394 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 PRTFDC1Q9NRG1 225 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 THSD1Q9NS62 852 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 CD300LBA8K4G0 201 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 ZNF805Q5CZA5 627 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 RNF111Q6ZNA4 994 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 OR8D2Q9GZM6 311 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 A0A1W2PPV4 95 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 CNOT4O95628 575 aaKnown RBP18.32■□□□□ 0.52
HDAC4-201ENST00000345617 PCBP2Q15366 365 aaKnown RBP eCLIP18.32■□□□□ 0.522e-6■■■■■ 27.4
HDAC4-201ENST00000345617 SLC43A2Q8N370 569 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 OR4E2Q8NGC2 313 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 ADM5C9JUS6 153 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 SNRNP70P08621 437 aaKnown RBP18.32■□□□□ 0.52
HDAC4-201ENST00000345617 RETREG3Q86VR2 466 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 GLB1L2Q8IW92 636 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 HUS1BQ8NHY5 278 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 A0A0U1RQK1 487 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 ZNF92Q03936 586 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 SHDQ96IW2 340 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 CPED1A4D0V7 1026 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 ANHXE9PGG2 379 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 CNR1P21554 472 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 EOGTQ5NDL2 527 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 HBMQ6B0K9 141 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 GTF2H5Q6ZYL4 71 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 RBM23Q86U06 439 aaKnown RBP18.32■□□□□ 0.52
HDAC4-201ENST00000345617 OR6F1Q8NGZ6 308 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 OCSTAMPQ9BR26 566 aa18.32■□□□□ 0.52
HDAC4-201ENST00000345617 C2orf78A6NCI8 922 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 FGF4P08620 206 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 SLC7A5P1Q8MH63 180 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 IL17RDQ8NFM7 739 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 OR4K5Q8NGD3 323 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 PPT1P50897 306 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 NKPD1Q17RQ9 610 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 OR10K2Q6IF99 312 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 ZC3H3Q8IXZ2 948 aaKnown RBP18.31■□□□□ 0.52
HDAC4-201ENST00000345617 ZNF100Q8IYN0 542 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 NPY6RQ99463 290 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 IL21RQ9HBE5 538 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 FAM122BQ7Z309 247 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 CD163Q86VB7 1156 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 OR1A2Q9Y585 309 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 CCDC163A0A0D9SF12 145 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 TMEM115Q12893 351 aaPredicted RBP18.31■□□□□ 0.52
HDAC4-201ENST00000345617 PDLIM3Q53GG5 364 aaPredicted RBP18.31■□□□□ 0.52
HDAC4-201ENST00000345617 LEG1Q6P5S2 330 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 RICTORQ6R327 1708 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 A0A1W2PQ09 198 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 HPGDSO60760 199 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 TLE1Q04724 770 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 RHOXF1Q8NHV9 184 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 DGKEP52429 567 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 BRICD5Q6PL45 260 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 UEVLDQ8IX04 471 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 ZBTB8AQ96BR9 441 aa18.31■□□□□ 0.52
HDAC4-201ENST00000345617 PRSS44E7EML9 344 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 TNFRSF10AO00220 468 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 BCKDHBP21953 392 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 IGFBP4P22692 258 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 CRHBPP24387 322 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 CLDN22Q8N7P3 220 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 SH3RF2Q8TEC5 729 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms